Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PRAMEP78395 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.35■□□□□ 0.05
PRAMEP78395 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.35■□□□□ 0.05
PRAMEP78395 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.35■□□□□ 0.05
PRAMEP78395 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.35■□□□□ 0.05
PRAMEP78395 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.35■□□□□ 0.05
PRAMEP78395 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.35■□□□□ 0.05
PRAMEP78395 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.35■□□□□ 0.05
PRAMEP78395 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.35■□□□□ 0.05
PRAMEP78395 AC107373.2-201ENST00000607735 490 ntBASIC15.35■□□□□ 0.05
PRAMEP78395 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.35■□□□□ 0.05
PRAMEP78395 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.35■□□□□ 0.05
PRAMEP78395 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PRAMEP78395 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEP78395 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PRAMEP78395 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PRAMEP78395 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.34■□□□□ 0.05
PRAMEP78395 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEP78395 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.34■□□□□ 0.05
PRAMEP78395 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 PTENP1-202ENST00000532280 3996 ntBASIC15.34■□□□□ 0.05
PRAMEP78395 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEP78395 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.34■□□□□ 0.05
PRAMEP78395 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.34■□□□□ 0.05
PRAMEP78395 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.34■□□□□ 0.05
PRAMEP78395 UGT1A2P-201ENST00000454886 866 ntBASIC15.34■□□□□ 0.05
PRAMEP78395 VDAC1P7-201ENST00000462417 847 ntBASIC15.34■□□□□ 0.05
PRAMEP78395 GAPDHP40-201ENST00000505218 1006 ntBASIC15.34■□□□□ 0.05
PRAMEP78395 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEP78395 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEP78395 AJ011932.1-201ENST00000621707 465 ntBASIC15.34■□□□□ 0.05
PRAMEP78395 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PRAMEP78395 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEP78395 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
PRAMEP78395 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEP78395 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.34■□□□□ 0.05
PRAMEP78395 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.33■□□□□ 0.05
PRAMEP78395 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PRAMEP78395 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEP78395 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEP78395 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PRAMEP78395 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
PRAMEP78395 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEP78395 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.33■□□□□ 0.05
PRAMEP78395 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.33■□□□□ 0.05
PRAMEP78395 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.33■□□□□ 0.05
PRAMEP78395 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.33■□□□□ 0.05
PRAMEP78395 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.33■□□□□ 0.05
PRAMEP78395 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEP78395 AC007787.1-201ENST00000588095 1583 ntBASIC15.33■□□□□ 0.05
PRAMEP78395 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.33■□□□□ 0.04
PRAMEP78395 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
PRAMEP78395 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.33■□□□□ 0.04
PRAMEP78395 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEP78395 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEP78395 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEP78395 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms