Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ASIC1P78348 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ASIC1P78348 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ASIC1P78348 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ASIC1P78348 MTHFR-210ENST00000641407 2387 ntBASIC16.95■□□□□ 0.3
ASIC1P78348 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ASIC1P78348 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.95■□□□□ 0.3
ASIC1P78348 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ASIC1P78348 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ASIC1P78348 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ASIC1P78348 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ASIC1P78348 KRT8P22-201ENST00000562317 1415 ntBASIC16.95■□□□□ 0.3
ASIC1P78348 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ASIC1P78348 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.94■□□□□ 0.3
ASIC1P78348 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.94■□□□□ 0.3
ASIC1P78348 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ASIC1P78348 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
ASIC1P78348 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.94■□□□□ 0.3
ASIC1P78348 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.94■□□□□ 0.3
ASIC1P78348 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ASIC1P78348 API5-211ENST00000534695 560 ntTSL 5 BASIC16.94■□□□□ 0.3
ASIC1P78348 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.94■□□□□ 0.3
ASIC1P78348 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.94■□□□□ 0.3
ASIC1P78348 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
ASIC1P78348 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ASIC1P78348 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ASIC1P78348 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ASIC1P78348 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.94■□□□□ 0.3
ASIC1P78348 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.94■□□□□ 0.3
ASIC1P78348 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ASIC1P78348 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ASIC1P78348 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ASIC1P78348 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.94■□□□□ 0.3
ASIC1P78348 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.93■□□□□ 0.3
ASIC1P78348 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.93■□□□□ 0.3
ASIC1P78348 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.93■□□□□ 0.3
ASIC1P78348 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
ASIC1P78348 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ASIC1P78348 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ASIC1P78348 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ASIC1P78348 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ASIC1P78348 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.93■□□□□ 0.3
ASIC1P78348 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ASIC1P78348 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.93■□□□□ 0.3
ASIC1P78348 NUS1P3-201ENST00000423502 862 ntBASIC16.93■□□□□ 0.3
ASIC1P78348 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.93■□□□□ 0.3
ASIC1P78348 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.93■□□□□ 0.3
ASIC1P78348 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.93■□□□□ 0.3
ASIC1P78348 MIR4745-201ENST00000577608 62 ntBASIC16.93■□□□□ 0.3
ASIC1P78348 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.93■□□□□ 0.3
ASIC1P78348 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.93■□□□□ 0.3
ASIC1P78348 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.93■□□□□ 0.3
ASIC1P78348 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.93■□□□□ 0.3
ASIC1P78348 TMEM261P1-201ENST00000604899 340 ntBASIC16.93■□□□□ 0.3
ASIC1P78348 LINC02084-201ENST00000606069 1096 ntBASIC16.93■□□□□ 0.3
ASIC1P78348 AC008494.3-201ENST00000606615 944 ntBASIC16.93■□□□□ 0.3
ASIC1P78348 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ASIC1P78348 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.93■□□□□ 0.3
ASIC1P78348 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 AC018442.1-201ENST00000421439 2061 ntBASIC16.93■□□□□ 0.3
ASIC1P78348 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.93■□□□□ 0.3
ASIC1P78348 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.93■□□□□ 0.3
ASIC1P78348 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.93■□□□□ 0.3
ASIC1P78348 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ASIC1P78348 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.93■□□□□ 0.3
ASIC1P78348 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ASIC1P78348 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ASIC1P78348 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ASIC1P78348 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ASIC1P78348 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.92■□□□□ 0.3
ASIC1P78348 AC015656.1-201ENST00000624209 3578 ntBASIC16.92■□□□□ 0.3
ASIC1P78348 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ASIC1P78348 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms