Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SUMO3P55854 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 MESTP3-201ENST00000503460 968 ntBASIC13.69□□□□□ -0.22
SUMO3P55854 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.69□□□□□ -0.22
SUMO3P55854 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SUMO3P55854 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.69□□□□□ -0.22
SUMO3P55854 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.69□□□□□ -0.22
SUMO3P55854 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.69□□□□□ -0.22
SUMO3P55854 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
SUMO3P55854 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.69□□□□□ -0.22
SUMO3P55854 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SUMO3P55854 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.69□□□□□ -0.22
SUMO3P55854 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.68□□□□□ -0.22
SUMO3P55854 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.68□□□□□ -0.22
SUMO3P55854 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.68□□□□□ -0.22
SUMO3P55854 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SUMO3P55854 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.68□□□□□ -0.22
SUMO3P55854 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.68□□□□□ -0.22
SUMO3P55854 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.68□□□□□ -0.22
SUMO3P55854 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
SUMO3P55854 CD8B2-202ENST00000417670 633 ntBASIC13.68□□□□□ -0.22
SUMO3P55854 BCRP2-202ENST00000447763 634 ntBASIC13.68□□□□□ -0.22
SUMO3P55854 FO681548.1-201ENST00000455617 1132 ntBASIC13.68□□□□□ -0.22
SUMO3P55854 BCRP6-201ENST00000510112 632 ntBASIC13.68□□□□□ -0.22
SUMO3P55854 BCRP7-201ENST00000511549 544 ntBASIC13.68□□□□□ -0.22
SUMO3P55854 RNA5SP486-201ENST00000515961 83 ntBASIC13.68□□□□□ -0.22
SUMO3P55854 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.68□□□□□ -0.22
SUMO3P55854 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.68□□□□□ -0.22
SUMO3P55854 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.68□□□□□ -0.22
SUMO3P55854 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 AC023824.1-201ENST00000562945 2975 ntBASIC13.68□□□□□ -0.22
SUMO3P55854 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.68□□□□□ -0.22
SUMO3P55854 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.68□□□□□ -0.22
SUMO3P55854 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.68□□□□□ -0.22
SUMO3P55854 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.68□□□□□ -0.22
SUMO3P55854 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SUMO3P55854 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.68□□□□□ -0.22
SUMO3P55854 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SUMO3P55854 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.68□□□□□ -0.22
SUMO3P55854 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.68□□□□□ -0.22
SUMO3P55854 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SUMO3P55854 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SUMO3P55854 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.68□□□□□ -0.22
SUMO3P55854 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 LINC00554-201ENST00000564841 3011 ntBASIC13.68□□□□□ -0.22
SUMO3P55854 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.68□□□□□ -0.22
SUMO3P55854 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.68□□□□□ -0.22
SUMO3P55854 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SUMO3P55854 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
SUMO3P55854 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SUMO3P55854 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
SUMO3P55854 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.67□□□□□ -0.22
SUMO3P55854 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SUMO3P55854 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms