Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH8P55286 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH8P55286 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH8P55286 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH8P55286 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH8P55286 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH8P55286 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH8P55286 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH8P55286 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH8P55286 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH8P55286 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDH8P55286 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH8P55286 AL596257.1-201ENST00000641463 2694 ntBASIC16.13■□□□□ 0.17
CDH8P55286 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CDH8P55286 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH8P55286 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH8P55286 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 TPM3P8-201ENST00000330554 643 ntBASIC16.13■□□□□ 0.17
CDH8P55286 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH8P55286 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 AC026954.1-201ENST00000429771 1293 ntBASIC16.13■□□□□ 0.17
CDH8P55286 AC245100.3-201ENST00000441281 285 ntBASIC16.13■□□□□ 0.17
CDH8P55286 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.13■□□□□ 0.17
CDH8P55286 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH8P55286 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH8P55286 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH8P55286 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.13■□□□□ 0.17
CDH8P55286 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH8P55286 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH8P55286 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 CICP23-201ENST00000605013 2741 ntBASIC16.13■□□□□ 0.17
CDH8P55286 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH8P55286 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH8P55286 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 CLUHP2-201ENST00000426660 1303 ntBASIC16.13■□□□□ 0.17
CDH8P55286 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH8P55286 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH8P55286 AC067930.6-201ENST00000623257 4947 ntBASIC16.13■□□□□ 0.17
CDH8P55286 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH8P55286 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDH8P55286 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH8P55286 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH8P55286 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH8P55286 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH8P55286 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDH8P55286 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH8P55286 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDH8P55286 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH8P55286 BOLA2P3-201ENST00000404566 256 ntBASIC16.12■□□□□ 0.17
CDH8P55286 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH8P55286 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH8P55286 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH8P55286 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CDH8P55286 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 AC138951.2-201ENST00000623455 1161 ntBASIC16.12■□□□□ 0.17
CDH8P55286 AL603764.1-201ENST00000636452 321 ntBASIC16.12■□□□□ 0.17
CDH8P55286 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CDH8P55286 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH8P55286 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDH8P55286 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDH8P55286 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH8P55286 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH8P55286 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH8P55286 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH8P55286 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH8P55286 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CDH8P55286 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDH8P55286 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH8P55286 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CDH8P55286 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms