Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 AC112693.3-201ENST00000624819 1983 ntBASIC15.72■□□□□ 0.11
EPHB3P54753 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 WASH3P-207ENST00000560956 1394 ntBASIC15.72■□□□□ 0.11
EPHB3P54753 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.72■□□□□ 0.11
EPHB3P54753 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.72■□□□□ 0.11
EPHB3P54753 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.72■□□□□ 0.11
EPHB3P54753 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
EPHB3P54753 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.71■□□□□ 0.11
EPHB3P54753 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.71■□□□□ 0.11
EPHB3P54753 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 AC009093.2-202ENST00000620513 2079 ntBASIC15.71■□□□□ 0.11
EPHB3P54753 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.71■□□□□ 0.11
EPHB3P54753 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
EPHB3P54753 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.71■□□□□ 0.11
EPHB3P54753 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.71■□□□□ 0.11
EPHB3P54753 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.71■□□□□ 0.11
EPHB3P54753 DUX4L46-201ENST00000566845 751 ntBASIC15.71■□□□□ 0.11
EPHB3P54753 RN7SL163P-201ENST00000583100 276 ntBASIC15.71■□□□□ 0.11
EPHB3P54753 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.71■□□□□ 0.11
EPHB3P54753 BNIP3P13-201ENST00000599968 566 ntBASIC15.71■□□□□ 0.11
EPHB3P54753 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.71■□□□□ 0.11
EPHB3P54753 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.71■□□□□ 0.11
EPHB3P54753 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 AC022748.3-201ENST00000621828 275 ntBASIC15.71■□□□□ 0.11
EPHB3P54753 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
EPHB3P54753 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.71■□□□□ 0.11
EPHB3P54753 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
EPHB3P54753 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
EPHB3P54753 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
EPHB3P54753 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
EPHB3P54753 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.71■□□□□ 0.1
EPHB3P54753 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
EPHB3P54753 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
EPHB3P54753 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.7■□□□□ 0.1
EPHB3P54753 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.7■□□□□ 0.1
EPHB3P54753 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.7■□□□□ 0.1
EPHB3P54753 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
EPHB3P54753 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
EPHB3P54753 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.7■□□□□ 0.1
EPHB3P54753 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 RN7SKP230-201ENST00000365642 335 ntBASIC15.7■□□□□ 0.1
EPHB3P54753 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 DPM3-202ENST00000368399 517 ntBASIC15.7■□□□□ 0.1
EPHB3P54753 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.7■□□□□ 0.1
EPHB3P54753 TLE1P1-201ENST00000422965 589 ntBASIC15.7■□□□□ 0.1
EPHB3P54753 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.7■□□□□ 0.1
EPHB3P54753 FAM58BP-201ENST00000439056 645 ntBASIC15.7■□□□□ 0.1
EPHB3P54753 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.7■□□□□ 0.1
EPHB3P54753 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.7■□□□□ 0.1
EPHB3P54753 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.7■□□□□ 0.1
EPHB3P54753 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.7■□□□□ 0.1
EPHB3P54753 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
EPHB3P54753 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.7■□□□□ 0.1
EPHB3P54753 AL162426.1-201ENST00000624141 743 ntBASIC15.7■□□□□ 0.1
EPHB3P54753 AC004923.1-202ENST00000642106 209 ntBASIC15.7■□□□□ 0.1
EPHB3P54753 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms