Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PMS1P54277 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.65■□□□□ 0.26
PMS1P54277 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PMS1P54277 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.65■□□□□ 0.26
PMS1P54277 MIR770-201ENST00000390219 98 ntBASIC16.65■□□□□ 0.26
PMS1P54277 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.65■□□□□ 0.26
PMS1P54277 AL442647.2-201ENST00000429864 857 ntBASIC16.65■□□□□ 0.26
PMS1P54277 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.65■□□□□ 0.26
PMS1P54277 AC026434.2-201ENST00000506094 1078 ntBASIC16.65■□□□□ 0.26
PMS1P54277 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.65■□□□□ 0.26
PMS1P54277 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.65■□□□□ 0.26
PMS1P54277 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.65■□□□□ 0.26
PMS1P54277 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.65■□□□□ 0.26
PMS1P54277 AL132655.2-201ENST00000596276 594 ntBASIC16.65■□□□□ 0.26
PMS1P54277 AC009118.2-201ENST00000613275 655 ntBASIC16.65■□□□□ 0.26
PMS1P54277 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.65■□□□□ 0.26
PMS1P54277 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.65■□□□□ 0.26
PMS1P54277 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.65■□□□□ 0.26
PMS1P54277 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMS1P54277 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.65■□□□□ 0.26
PMS1P54277 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PMS1P54277 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
PMS1P54277 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.65■□□□□ 0.26
PMS1P54277 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PMS1P54277 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PMS1P54277 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.64■□□□□ 0.26
PMS1P54277 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PMS1P54277 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PMS1P54277 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PMS1P54277 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PMS1P54277 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PMS1P54277 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PMS1P54277 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.64■□□□□ 0.25
PMS1P54277 EIF3FP3-201ENST00000434851 1086 ntBASIC16.64■□□□□ 0.25
PMS1P54277 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.64■□□□□ 0.25
PMS1P54277 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.64■□□□□ 0.25
PMS1P54277 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.64■□□□□ 0.25
PMS1P54277 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.64■□□□□ 0.25
PMS1P54277 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.64■□□□□ 0.25
PMS1P54277 AC005252.2-201ENST00000624630 1141 ntBASIC16.64■□□□□ 0.25
PMS1P54277 AC007541.1-201ENST00000570282 1469 ntBASIC16.64■□□□□ 0.25
PMS1P54277 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.64■□□□□ 0.25
PMS1P54277 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.64■□□□□ 0.25
PMS1P54277 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
PMS1P54277 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PMS1P54277 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PMS1P54277 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMS1P54277 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
PMS1P54277 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 AC015802.1-201ENST00000588104 1449 ntBASIC16.63■□□□□ 0.25
PMS1P54277 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PMS1P54277 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.63■□□□□ 0.25
PMS1P54277 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PMS1P54277 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMS1P54277 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PMS1P54277 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.63■□□□□ 0.25
PMS1P54277 DFFBP1-201ENST00000433250 979 ntBASIC16.63■□□□□ 0.25
PMS1P54277 TSPY16P-201ENST00000449843 468 ntBASIC16.63■□□□□ 0.25
PMS1P54277 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.63■□□□□ 0.25
PMS1P54277 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms