Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC079776.1-201ENST00000401540 1152 ntBASIC15.3■□□□□ 0.04
LIMK2P53671 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.3■□□□□ 0.04
LIMK2P53671 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LIMK2P53671 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LIMK2P53671 ACA64.2-201ENST00000459014 129 ntBASIC15.3■□□□□ 0.04
LIMK2P53671 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.3■□□□□ 0.04
LIMK2P53671 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LIMK2P53671 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LIMK2P53671 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.3■□□□□ 0.04
LIMK2P53671 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LIMK2P53671 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LIMK2P53671 KRT17P8-201ENST00000540749 863 ntBASIC15.3■□□□□ 0.04
LIMK2P53671 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.3■□□□□ 0.04
LIMK2P53671 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.3■□□□□ 0.04
LIMK2P53671 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.3■□□□□ 0.04
LIMK2P53671 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.3■□□□□ 0.04
LIMK2P53671 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 MIR8072-201ENST00000614241 80 ntBASIC15.3■□□□□ 0.04
LIMK2P53671 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.3■□□□□ 0.04
LIMK2P53671 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
LIMK2P53671 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.3■□□□□ 0.04
LIMK2P53671 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
LIMK2P53671 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.29■□□□□ 0.04
LIMK2P53671 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LIMK2P53671 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.29■□□□□ 0.04
LIMK2P53671 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 AC113367.3-201ENST00000508316 1912 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 BX640514.1-201ENST00000583223 1918 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 INTS4P1-203ENST00000641008 3683 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LIMK2P53671 GRK6P1-201ENST00000400595 1711 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 AL161772.1-201ENST00000610494 4412 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.29■□□□□ 0.04
LIMK2P53671 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LIMK2P53671 LILRP1-201ENST00000444199 1370 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LIMK2P53671 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.29■□□□□ 0.04
LIMK2P53671 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.29■□□□□ 0.04
LIMK2P53671 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 AC112492.5-201ENST00000421897 457 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.29■□□□□ 0.04
LIMK2P53671 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 AC007389.4-201ENST00000454674 793 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 RN7SL399P-201ENST00000471648 279 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.29■□□□□ 0.04
LIMK2P53671 AC092552.1-201ENST00000547243 906 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 RAB43P1-201ENST00000561790 589 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.29■□□□□ 0.04
LIMK2P53671 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.29■□□□□ 0.04
LIMK2P53671 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LIMK2P53671 AL033527.5-201ENST00000641382 801 ntBASIC15.29■□□□□ 0.04
LIMK2P53671 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LIMK2P53671 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.29■□□□□ 0.04
LIMK2P53671 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LIMK2P53671 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.28■□□□□ 0.04
LIMK2P53671 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.28■□□□□ 0.04
LIMK2P53671 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LIMK2P53671 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.28■□□□□ 0.04
LIMK2P53671 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.28■□□□□ 0.04
LIMK2P53671 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LIMK2P53671 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.28■□□□□ 0.04
LIMK2P53671 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LIMK2P53671 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.28■□□□□ 0.04
LIMK2P53671 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.28■□□□□ 0.04
LIMK2P53671 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.28■□□□□ 0.04
LIMK2P53671 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
LIMK2P53671 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.28■□□□□ 0.04
LIMK2P53671 AL391069.4-201ENST00000609583 481 ntBASIC15.28■□□□□ 0.04
LIMK2P53671 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.28■□□□□ 0.04
LIMK2P53671 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms