Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.46□□□□□ -0.25
SLC25A1P53007 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.46□□□□□ -0.25
SLC25A1P53007 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC25A1P53007 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC25A1P53007 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC25A1P53007 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SLC25A1P53007 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC25A1P53007 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC25A1P53007 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC25A1P53007 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SLC25A1P53007 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC25A1P53007 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.46□□□□□ -0.25
SLC25A1P53007 VDAC1P7-201ENST00000462417 847 ntBASIC13.46□□□□□ -0.25
SLC25A1P53007 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.46□□□□□ -0.25
SLC25A1P53007 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.46□□□□□ -0.25
SLC25A1P53007 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.46□□□□□ -0.25
SLC25A1P53007 AP001160.2-201ENST00000596071 487 ntBASIC13.46□□□□□ -0.25
SLC25A1P53007 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.46□□□□□ -0.25
SLC25A1P53007 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SLC25A1P53007 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.46□□□□□ -0.25
SLC25A1P53007 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
SLC25A1P53007 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SLC25A1P53007 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.46□□□□□ -0.26
SLC25A1P53007 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SLC25A1P53007 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SLC25A1P53007 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SLC25A1P53007 AC092135.3-201ENST00000624151 1846 ntBASIC13.46□□□□□ -0.26
SLC25A1P53007 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SLC25A1P53007 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.46□□□□□ -0.26
SLC25A1P53007 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.46□□□□□ -0.26
SLC25A1P53007 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 AC022144.1-201ENST00000602255 1580 ntBASIC13.45□□□□□ -0.26
SLC25A1P53007 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.45□□□□□ -0.26
SLC25A1P53007 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.45□□□□□ -0.26
SLC25A1P53007 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
SLC25A1P53007 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
SLC25A1P53007 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.45□□□□□ -0.26
SLC25A1P53007 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.45□□□□□ -0.26
SLC25A1P53007 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 AC004890.2-204ENST00000481968 304 ntBASIC13.45□□□□□ -0.26
SLC25A1P53007 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.45□□□□□ -0.26
SLC25A1P53007 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.45□□□□□ -0.26
SLC25A1P53007 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 DUX4L27-201ENST00000554796 1261 ntBASIC13.45□□□□□ -0.26
SLC25A1P53007 DUX4L47-201ENST00000566374 394 ntBASIC13.45□□□□□ -0.26
SLC25A1P53007 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.45□□□□□ -0.26
SLC25A1P53007 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 BX539320.1-201ENST00000623759 877 ntBASIC13.45□□□□□ -0.26
SLC25A1P53007 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.45□□□□□ -0.26
SLC25A1P53007 AC006504.5-208ENST00000588784 2401 ntBASIC13.45□□□□□ -0.26
SLC25A1P53007 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
SLC25A1P53007 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SLC25A1P53007 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.45□□□□□ -0.26
SLC25A1P53007 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SLC25A1P53007 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SLC25A1P53007 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms