Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 AC091951.1-201ENST00000512854 2465 ntBASIC15.97■□□□□ 0.15
LHX1P48742 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.97■□□□□ 0.15
LHX1P48742 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.97■□□□□ 0.15
LHX1P48742 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.97■□□□□ 0.15
LHX1P48742 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LHX1P48742 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LHX1P48742 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LHX1P48742 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LHX1P48742 AL023775.1-201ENST00000454907 1746 ntBASIC15.97■□□□□ 0.15
LHX1P48742 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.96■□□□□ 0.15
LHX1P48742 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.96■□□□□ 0.15
LHX1P48742 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
LHX1P48742 AGAP7P-201ENST00000582299 2062 ntBASIC15.96■□□□□ 0.15
LHX1P48742 AGAP14-201ENST00000624701 2060 ntBASIC15.96■□□□□ 0.15
LHX1P48742 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.96■□□□□ 0.15
LHX1P48742 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LHX1P48742 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.96■□□□□ 0.15
LHX1P48742 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
LHX1P48742 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.96■□□□□ 0.15
LHX1P48742 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.96■□□□□ 0.15
LHX1P48742 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LHX1P48742 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
LHX1P48742 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 FAM86MP-201ENST00000340703 885 ntBASIC15.96■□□□□ 0.15
LHX1P48742 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 CHMP1AP1-201ENST00000445563 662 ntBASIC15.96■□□□□ 0.15
LHX1P48742 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.96■□□□□ 0.15
LHX1P48742 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.96■□□□□ 0.15
LHX1P48742 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.96■□□□□ 0.15
LHX1P48742 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
LHX1P48742 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.96■□□□□ 0.15
LHX1P48742 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LHX1P48742 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.96■□□□□ 0.15
LHX1P48742 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LHX1P48742 AC003102.2-201ENST00000589195 1469 ntBASIC15.96■□□□□ 0.14
LHX1P48742 AC063926.3-201ENST00000624734 5658 ntBASIC15.96■□□□□ 0.14
LHX1P48742 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
LHX1P48742 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
LHX1P48742 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.95■□□□□ 0.14
LHX1P48742 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.95■□□□□ 0.14
LHX1P48742 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 AC011840.2-201ENST00000563063 1520 ntBASIC15.95■□□□□ 0.14
LHX1P48742 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
LHX1P48742 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LHX1P48742 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.95■□□□□ 0.14
LHX1P48742 MIR326-201ENST00000362220 95 ntBASIC15.95■□□□□ 0.14
LHX1P48742 RN7SKP230-201ENST00000365642 335 ntBASIC15.95■□□□□ 0.14
LHX1P48742 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.95■□□□□ 0.14
LHX1P48742 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LHX1P48742 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
LHX1P48742 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.95■□□□□ 0.14
LHX1P48742 MTX1P1-201ENST00000440904 838 ntBASIC15.95■□□□□ 0.14
LHX1P48742 GOLGA2P4-201ENST00000441462 777 ntBASIC15.95■□□□□ 0.14
LHX1P48742 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LHX1P48742 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.95■□□□□ 0.14
LHX1P48742 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.95■□□□□ 0.14
LHX1P48742 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.95■□□□□ 0.14
LHX1P48742 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.95■□□□□ 0.14
LHX1P48742 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LHX1P48742 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LHX1P48742 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms