Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 AC084364.1-201ENST00000551967 1556 ntBASIC15.81■□□□□ 0.12
MTHFRP42898 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.81■□□□□ 0.12
MTHFRP42898 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.81■□□□□ 0.12
MTHFRP42898 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 AC005324.6-201ENST00000587972 613 ntBASIC15.81■□□□□ 0.12
MTHFRP42898 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.81■□□□□ 0.12
MTHFRP42898 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 AP000346.4-201ENST00000614827 381 ntBASIC15.81■□□□□ 0.12
MTHFRP42898 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.81■□□□□ 0.12
MTHFRP42898 DBET-201ENST00000630918 3363 ntBASIC15.81■□□□□ 0.12
MTHFRP42898 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.81■□□□□ 0.12
MTHFRP42898 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.81■□□□□ 0.12
MTHFRP42898 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MTHFRP42898 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.8■□□□□ 0.12
MTHFRP42898 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.8■□□□□ 0.12
MTHFRP42898 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.8■□□□□ 0.12
MTHFRP42898 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.8■□□□□ 0.12
MTHFRP42898 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.8■□□□□ 0.12
MTHFRP42898 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.8■□□□□ 0.12
MTHFRP42898 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.8■□□□□ 0.12
MTHFRP42898 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.8■□□□□ 0.12
MTHFRP42898 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.8■□□□□ 0.12
MTHFRP42898 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.8■□□□□ 0.12
MTHFRP42898 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.8■□□□□ 0.12
MTHFRP42898 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.8■□□□□ 0.12
MTHFRP42898 AC100827.2-201ENST00000563214 1194 ntBASIC15.8■□□□□ 0.12
MTHFRP42898 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.8■□□□□ 0.12
MTHFRP42898 AC018635.2-201ENST00000608625 364 ntBASIC15.8■□□□□ 0.12
MTHFRP42898 AL136301.1-201ENST00000615830 422 ntBASIC15.8■□□□□ 0.12
MTHFRP42898 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.8■□□□□ 0.12
MTHFRP42898 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MTHFRP42898 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 AC023824.1-201ENST00000562945 2975 ntBASIC15.8■□□□□ 0.12
MTHFRP42898 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.8■□□□□ 0.12
MTHFRP42898 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MTHFRP42898 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
MTHFRP42898 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
MTHFRP42898 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.79■□□□□ 0.12
MTHFRP42898 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
MTHFRP42898 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
MTHFRP42898 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 FKBP4P6-201ENST00000457486 1332 ntBASIC15.79■□□□□ 0.12
MTHFRP42898 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 AL596087.1-201ENST00000400979 1969 ntBASIC15.79■□□□□ 0.12
MTHFRP42898 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.79■□□□□ 0.12
MTHFRP42898 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
MTHFRP42898 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 PUDPP3-201ENST00000445368 636 ntBASIC15.79■□□□□ 0.12
MTHFRP42898 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.79■□□□□ 0.12
MTHFRP42898 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.79■□□□□ 0.12
MTHFRP42898 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.79■□□□□ 0.12
MTHFRP42898 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.79■□□□□ 0.12
MTHFRP42898 MIR3147-201ENST00000577811 66 ntBASIC15.79■□□□□ 0.12
MTHFRP42898 MIR4750-201ENST00000584564 56 ntBASIC15.79■□□□□ 0.12
MTHFRP42898 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MTHFRP42898 AC020922.3-201ENST00000595064 547 ntBASIC15.79■□□□□ 0.12
MTHFRP42898 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.79■□□□□ 0.12
MTHFRP42898 AC090164.2-201ENST00000611487 516 ntBASIC15.79■□□□□ 0.12
MTHFRP42898 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.79■□□□□ 0.12
MTHFRP42898 AF254983.2-201ENST00000612331 135 ntBASIC15.79■□□□□ 0.12
MTHFRP42898 AL162426.1-201ENST00000624141 743 ntBASIC15.79■□□□□ 0.12
MTHFRP42898 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms