Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
COL15A1P39059 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
COL15A1P39059 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
COL15A1P39059 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
COL15A1P39059 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.92■□□□□ 0.62
COL15A1P39059 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL15A1P39059 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
COL15A1P39059 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.92■□□□□ 0.62
COL15A1P39059 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.92■□□□□ 0.62
COL15A1P39059 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.92■□□□□ 0.62
COL15A1P39059 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.92■□□□□ 0.62
COL15A1P39059 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 KRT8P21-201ENST00000430398 1491 ntBASIC18.92■□□□□ 0.62
COL15A1P39059 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.92■□□□□ 0.62
COL15A1P39059 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.92■□□□□ 0.62
COL15A1P39059 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL15A1P39059 MIR4750-201ENST00000584564 56 ntBASIC18.92■□□□□ 0.62
COL15A1P39059 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.92■□□□□ 0.62
COL15A1P39059 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.92■□□□□ 0.62
COL15A1P39059 AC013268.4-201ENST00000637413 2228 ntBASIC18.92■□□□□ 0.62
COL15A1P39059 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL15A1P39059 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL15A1P39059 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COL15A1P39059 AC136759.1-202ENST00000530858 2194 ntBASIC18.91■□□□□ 0.62
COL15A1P39059 AL109954.1-202ENST00000564051 2148 ntBASIC18.91■□□□□ 0.62
COL15A1P39059 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL15A1P39059 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.91■□□□□ 0.62
COL15A1P39059 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL15A1P39059 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COL15A1P39059 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL15A1P39059 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL15A1P39059 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
COL15A1P39059 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COL15A1P39059 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.91■□□□□ 0.62
COL15A1P39059 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COL15A1P39059 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL15A1P39059 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.91■□□□□ 0.62
COL15A1P39059 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.91■□□□□ 0.62
COL15A1P39059 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.91■□□□□ 0.62
COL15A1P39059 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.91■□□□□ 0.62
COL15A1P39059 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.91■□□□□ 0.62
COL15A1P39059 ALG3P1-201ENST00000508806 1114 ntBASIC18.91■□□□□ 0.62
COL15A1P39059 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.91■□□□□ 0.62
COL15A1P39059 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COL15A1P39059 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.91■□□□□ 0.62
COL15A1P39059 RN7SL736P-201ENST00000613111 269 ntBASIC18.91■□□□□ 0.62
COL15A1P39059 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.91■□□□□ 0.62
COL15A1P39059 AL805961.1-201ENST00000642026 753 ntBASIC18.91■□□□□ 0.62
COL15A1P39059 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.91■□□□□ 0.62
COL15A1P39059 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.91■□□□□ 0.62
COL15A1P39059 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL15A1P39059 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL15A1P39059 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.9■□□□□ 0.62
COL15A1P39059 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.9■□□□□ 0.62
COL15A1P39059 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL15A1P39059 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COL15A1P39059 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.9■□□□□ 0.62
COL15A1P39059 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COL15A1P39059 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
COL15A1P39059 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 AC239868.1-201ENST00000369385 493 ntBASIC18.9■□□□□ 0.62
COL15A1P39059 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COL15A1P39059 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
COL15A1P39059 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.9■□□□□ 0.62
COL15A1P39059 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.9■□□□□ 0.62
COL15A1P39059 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.9■□□□□ 0.62
COL15A1P39059 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms