Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 AL035456.1-201ENST00000456064 1369 ntBASIC14.65□□□□□ -0.06
CAPN3P20807 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.65□□□□□ -0.06
CAPN3P20807 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CAPN3P20807 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 ARSEP1-201ENST00000420443 635 ntBASIC14.65□□□□□ -0.06
CAPN3P20807 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPN3P20807 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPN3P20807 AL079307.3-201ENST00000556114 283 ntBASIC14.65□□□□□ -0.06
CAPN3P20807 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPN3P20807 AC025048.3-201ENST00000590609 569 ntBASIC14.65□□□□□ -0.06
CAPN3P20807 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 AC004233.3-201ENST00000607794 1269 ntBASIC14.65□□□□□ -0.06
CAPN3P20807 AC005702.4-201ENST00000618393 416 ntBASIC14.65□□□□□ -0.06
CAPN3P20807 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPN3P20807 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPN3P20807 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CAPN3P20807 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CAPN3P20807 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN3P20807 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CAPN3P20807 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CAPN3P20807 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.65□□□□□ -0.07
CAPN3P20807 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.65□□□□□ -0.07
CAPN3P20807 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN3P20807 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 LILRP1-201ENST00000444199 1370 ntBASIC14.64□□□□□ -0.07
CAPN3P20807 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CAPN3P20807 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CAPN3P20807 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CAPN3P20807 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPN3P20807 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CAPN3P20807 RPL13P2-201ENST00000440687 659 ntBASIC14.64□□□□□ -0.07
CAPN3P20807 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN3P20807 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN3P20807 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.64□□□□□ -0.07
CAPN3P20807 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPN3P20807 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CAPN3P20807 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPN3P20807 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CAPN3P20807 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPN3P20807 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.64□□□□□ -0.07
CAPN3P20807 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CAPN3P20807 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.64□□□□□ -0.07
CAPN3P20807 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CAPN3P20807 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN3P20807 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CAPN3P20807 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CAPN3P20807 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN3P20807 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CAPN3P20807 AC092135.3-201ENST00000624151 1846 ntBASIC14.64□□□□□ -0.07
CAPN3P20807 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
CAPN3P20807 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAPN3P20807 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.64□□□□□ -0.07
CAPN3P20807 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN3P20807 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms