Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 ACTBP8-201ENST00000403258 1108 ntBASIC15.31■□□□□ 0.04
HLA-DPA1P20036 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 KRT18P25-201ENST00000508931 1278 ntBASIC15.31■□□□□ 0.04
HLA-DPA1P20036 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 DUX4L47-201ENST00000566374 394 ntBASIC15.31■□□□□ 0.04
HLA-DPA1P20036 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HLA-DPA1P20036 CICP23-201ENST00000605013 2741 ntBASIC15.3■□□□□ 0.04
HLA-DPA1P20036 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 AC022137.2-201ENST00000503482 481 ntBASIC15.3■□□□□ 0.04
HLA-DPA1P20036 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DPA1P20036 CICP24-201ENST00000605464 2705 ntBASIC15.3■□□□□ 0.04
HLA-DPA1P20036 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPA1P20036 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms