Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.79■□□□□ 0.28
TRIM21P19474 TPRX2P-201ENST00000535362 881 ntBASIC16.79■□□□□ 0.28
TRIM21P19474 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRIM21P19474 AC104794.3-201ENST00000566840 1248 ntBASIC16.79■□□□□ 0.28
TRIM21P19474 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRIM21P19474 LINC02560-201ENST00000596379 459 ntBASIC16.79■□□□□ 0.28
TRIM21P19474 AC008761.3-201ENST00000624803 892 ntBASIC16.79■□□□□ 0.28
TRIM21P19474 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM21P19474 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM21P19474 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM21P19474 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM21P19474 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM21P19474 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM21P19474 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TRIM21P19474 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM21P19474 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM21P19474 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM21P19474 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM21P19474 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM21P19474 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM21P19474 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM21P19474 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM21P19474 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
TRIM21P19474 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM21P19474 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM21P19474 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM21P19474 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM21P19474 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM21P19474 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
TRIM21P19474 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM21P19474 AC027307.3-201ENST00000594262 1100 ntBASIC16.78■□□□□ 0.28
TRIM21P19474 SRD5A3P1-201ENST00000603021 949 ntBASIC16.78■□□□□ 0.28
TRIM21P19474 AC025181.2-201ENST00000606994 802 ntBASIC16.78■□□□□ 0.28
TRIM21P19474 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.78■□□□□ 0.28
TRIM21P19474 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM21P19474 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM21P19474 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 AC117489.1-201ENST00000625169 3217 ntBASIC16.78■□□□□ 0.28
TRIM21P19474 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM21P19474 AC138969.3-201ENST00000546612 1459 ntBASIC16.78■□□□□ 0.28
TRIM21P19474 AC138932.2-201ENST00000548268 1459 ntBASIC16.78■□□□□ 0.28
TRIM21P19474 AC126755.4-201ENST00000549796 1459 ntBASIC16.78■□□□□ 0.28
TRIM21P19474 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM21P19474 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM21P19474 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRIM21P19474 MTHFR-210ENST00000641407 2387 ntBASIC16.78■□□□□ 0.28
TRIM21P19474 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM21P19474 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRIM21P19474 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM21P19474 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM21P19474 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
TRIM21P19474 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM21P19474 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRIM21P19474 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRIM21P19474 AC018529.2-202ENST00000611482 3087 ntBASIC16.77■□□□□ 0.28
TRIM21P19474 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM21P19474 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM21P19474 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.77■□□□□ 0.28
TRIM21P19474 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM21P19474 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRIM21P19474 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM21P19474 AC002472.2-201ENST00000442739 958 ntBASIC16.77■□□□□ 0.28
TRIM21P19474 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM21P19474 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.77■□□□□ 0.28
TRIM21P19474 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.77■□□□□ 0.28
TRIM21P19474 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM21P19474 AC055876.2-201ENST00000531834 546 ntBASIC16.77■□□□□ 0.28
TRIM21P19474 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRIM21P19474 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM21P19474 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM21P19474 RRP7BP-205ENST00000566851 833 ntBASIC16.77■□□□□ 0.28
TRIM21P19474 AC036164.1-201ENST00000570544 333 ntBASIC16.77■□□□□ 0.28
TRIM21P19474 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM21P19474 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM21P19474 AC004840.1-201ENST00000636359 365 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms