Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TCF4P15884 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.79■□□□□ 0.12
TCF4P15884 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TCF4P15884 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
TCF4P15884 KLF2P2-201ENST00000416807 1039 ntBASIC15.79■□□□□ 0.12
TCF4P15884 SOCS2P1-201ENST00000417727 557 ntBASIC15.79■□□□□ 0.12
TCF4P15884 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.79■□□□□ 0.12
TCF4P15884 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.79■□□□□ 0.12
TCF4P15884 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.79■□□□□ 0.12
TCF4P15884 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
TCF4P15884 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.79■□□□□ 0.12
TCF4P15884 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TCF4P15884 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TCF4P15884 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.79■□□□□ 0.12
TCF4P15884 DUX4L47-201ENST00000566374 394 ntBASIC15.79■□□□□ 0.12
TCF4P15884 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.79■□□□□ 0.12
TCF4P15884 AC004466.1-201ENST00000599515 1080 ntBASIC15.79■□□□□ 0.12
TCF4P15884 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.79■□□□□ 0.12
TCF4P15884 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 RPSAP52-203ENST00000622976 1023 ntBASIC15.79■□□□□ 0.12
TCF4P15884 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.79■□□□□ 0.12
TCF4P15884 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
TCF4P15884 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TCF4P15884 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.79■□□□□ 0.12
TCF4P15884 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TCF4P15884 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCF4P15884 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.78■□□□□ 0.12
TCF4P15884 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TCF4P15884 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
TCF4P15884 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
TCF4P15884 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.78■□□□□ 0.12
TCF4P15884 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TCF4P15884 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.78■□□□□ 0.12
TCF4P15884 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.78■□□□□ 0.12
TCF4P15884 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.78■□□□□ 0.12
TCF4P15884 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.78■□□□□ 0.12
TCF4P15884 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TCF4P15884 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCF4P15884 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TCF4P15884 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCF4P15884 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TCF4P15884 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TCF4P15884 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.77■□□□□ 0.12
TCF4P15884 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
TCF4P15884 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TCF4P15884 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCF4P15884 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TCF4P15884 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TCF4P15884 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCF4P15884 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms