Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.08□□□□□ -0.32
ACAA1P09110 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
ACAA1P09110 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.08□□□□□ -0.32
ACAA1P09110 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.08□□□□□ -0.32
ACAA1P09110 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.08□□□□□ -0.32
ACAA1P09110 MEP1AP4-201ENST00000423244 1087 ntBASIC13.08□□□□□ -0.32
ACAA1P09110 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ACAA1P09110 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.08□□□□□ -0.32
ACAA1P09110 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
ACAA1P09110 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
ACAA1P09110 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
ACAA1P09110 AL096865.1-201ENST00000606796 927 ntBASIC13.08□□□□□ -0.32
ACAA1P09110 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.08□□□□□ -0.32
ACAA1P09110 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.08□□□□□ -0.32
ACAA1P09110 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ACAA1P09110 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.08□□□□□ -0.32
ACAA1P09110 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ACAA1P09110 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.08□□□□□ -0.32
ACAA1P09110 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.08□□□□□ -0.32
ACAA1P09110 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ACAA1P09110 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
ACAA1P09110 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.07□□□□□ -0.32
ACAA1P09110 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ACAA1P09110 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.07□□□□□ -0.32
ACAA1P09110 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.07□□□□□ -0.32
ACAA1P09110 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.07□□□□□ -0.32
ACAA1P09110 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ACAA1P09110 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ACAA1P09110 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.07□□□□□ -0.32
ACAA1P09110 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
ACAA1P09110 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.07□□□□□ -0.32
ACAA1P09110 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.07□□□□□ -0.32
ACAA1P09110 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 GAPDHP40-201ENST00000505218 1006 ntBASIC13.07□□□□□ -0.32
ACAA1P09110 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.07□□□□□ -0.32
ACAA1P09110 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.07□□□□□ -0.32
ACAA1P09110 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.07□□□□□ -0.32
ACAA1P09110 SPCS2P1-201ENST00000561636 679 ntBASIC13.07□□□□□ -0.32
ACAA1P09110 RARRES2P5-201ENST00000564013 466 ntBASIC13.07□□□□□ -0.32
ACAA1P09110 RRP7BP-205ENST00000566851 833 ntBASIC13.07□□□□□ -0.32
ACAA1P09110 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.07□□□□□ -0.32
ACAA1P09110 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.07□□□□□ -0.32
ACAA1P09110 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.07□□□□□ -0.32
ACAA1P09110 AC009118.2-201ENST00000613275 655 ntBASIC13.07□□□□□ -0.32
ACAA1P09110 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.07□□□□□ -0.32
ACAA1P09110 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.07□□□□□ -0.32
ACAA1P09110 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.07□□□□□ -0.32
ACAA1P09110 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.07□□□□□ -0.32
ACAA1P09110 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.07□□□□□ -0.32
ACAA1P09110 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ACAA1P09110 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.07□□□□□ -0.32
ACAA1P09110 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
ACAA1P09110 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
ACAA1P09110 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ACAA1P09110 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ACAA1P09110 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ACAA1P09110 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ACAA1P09110 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms