Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 AC093726.1-201ENST00000608064 963 ntBASIC13.98□□□□□ -0.17
THBS1P07996 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.98□□□□□ -0.17
THBS1P07996 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 AL603764.1-201ENST00000636452 321 ntBASIC13.98□□□□□ -0.17
THBS1P07996 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 AC007686.3-201ENST00000619017 3487 ntBASIC13.98□□□□□ -0.17
THBS1P07996 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
THBS1P07996 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 KRT8P14-201ENST00000414254 1442 ntBASIC13.98□□□□□ -0.17
THBS1P07996 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
THBS1P07996 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
THBS1P07996 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.98□□□□□ -0.17
THBS1P07996 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
THBS1P07996 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.97□□□□□ -0.17
THBS1P07996 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.97□□□□□ -0.17
THBS1P07996 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
THBS1P07996 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.97□□□□□ -0.17
THBS1P07996 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC13.97□□□□□ -0.17
THBS1P07996 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
THBS1P07996 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.97□□□□□ -0.17
THBS1P07996 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
THBS1P07996 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.97□□□□□ -0.17
THBS1P07996 AC025048.6-201ENST00000634326 1161 ntBASIC13.97□□□□□ -0.17
THBS1P07996 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.97□□□□□ -0.17
THBS1P07996 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
THBS1P07996 AC023090.2-201ENST00000625182 2110 ntBASIC13.97□□□□□ -0.17
THBS1P07996 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.97□□□□□ -0.17
THBS1P07996 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.97□□□□□ -0.17
THBS1P07996 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.97□□□□□ -0.17
THBS1P07996 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
THBS1P07996 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
THBS1P07996 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
THBS1P07996 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.96□□□□□ -0.17
THBS1P07996 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.96□□□□□ -0.17
THBS1P07996 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
THBS1P07996 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
THBS1P07996 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
THBS1P07996 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
THBS1P07996 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.96□□□□□ -0.17
THBS1P07996 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
THBS1P07996 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
THBS1P07996 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
THBS1P07996 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms