Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DOAP06340 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DOAP06340 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DOAP06340 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HLA-DOAP06340 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DOAP06340 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DOAP06340 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DOAP06340 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DOAP06340 TLE1P1-201ENST00000422965 589 ntBASIC17.73■□□□□ 0.43
HLA-DOAP06340 AC106794.1-201ENST00000506935 792 ntBASIC17.73■□□□□ 0.43
HLA-DOAP06340 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DOAP06340 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
HLA-DOAP06340 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DOAP06340 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DOAP06340 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DOAP06340 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DOAP06340 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DOAP06340 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DOAP06340 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DOAP06340 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DOAP06340 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DOAP06340 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DOAP06340 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DOAP06340 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.72■□□□□ 0.43
HLA-DOAP06340 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DOAP06340 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DOAP06340 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DOAP06340 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DOAP06340 AC007950.2-201ENST00000615045 2347 ntBASIC17.72■□□□□ 0.43
HLA-DOAP06340 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DOAP06340 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOAP06340 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 NORAD-201ENST00000565493 5339 ntBASIC17.71■□□□□ 0.43
HLA-DOAP06340 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 AC010141.1-201ENST00000411585 623 ntBASIC17.71■□□□□ 0.43
HLA-DOAP06340 AC016700.1-201ENST00000429424 312 ntBASIC17.71■□□□□ 0.43
HLA-DOAP06340 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 RNMTL1P1-201ENST00000454103 560 ntBASIC17.71■□□□□ 0.43
HLA-DOAP06340 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.71■□□□□ 0.43
HLA-DOAP06340 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 AC009955.4-201ENST00000597192 544 ntBASIC17.71■□□□□ 0.43
HLA-DOAP06340 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 AC022748.3-201ENST00000621828 275 ntBASIC17.71■□□□□ 0.43
HLA-DOAP06340 AL162426.1-201ENST00000624141 743 ntBASIC17.71■□□□□ 0.43
HLA-DOAP06340 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 REXO1L2P-201ENST00000425429 2069 ntBASIC17.71■□□□□ 0.43
HLA-DOAP06340 PAUPAR-201ENST00000630360 2965 ntBASIC17.71■□□□□ 0.43
HLA-DOAP06340 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DOAP06340 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOAP06340 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms