Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.5■□□□□ 0.23
VTNP04004 AC138028.6-201ENST00000616106 1482 ntBASIC16.5■□□□□ 0.23
VTNP04004 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VTNP04004 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.5■□□□□ 0.23
VTNP04004 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.5■□□□□ 0.23
VTNP04004 SERPINA13P-202ENST00000478994 924 ntBASIC16.5■□□□□ 0.23
VTNP04004 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.5■□□□□ 0.23
VTNP04004 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.5■□□□□ 0.23
VTNP04004 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.5■□□□□ 0.23
VTNP04004 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VTNP04004 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.5■□□□□ 0.23
VTNP04004 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.5■□□□□ 0.23
VTNP04004 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VTNP04004 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.5■□□□□ 0.23
VTNP04004 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.5■□□□□ 0.23
VTNP04004 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
VTNP04004 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VTNP04004 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.49■□□□□ 0.23
VTNP04004 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.49■□□□□ 0.23
VTNP04004 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.49■□□□□ 0.23
VTNP04004 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.49■□□□□ 0.23
VTNP04004 BX284668.4-201ENST00000453917 508 ntBASIC16.49■□□□□ 0.23
VTNP04004 RNMTL1P1-201ENST00000454103 560 ntBASIC16.49■□□□□ 0.23
VTNP04004 AC021723.1-201ENST00000486306 515 ntBASIC16.49■□□□□ 0.23
VTNP04004 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.49■□□□□ 0.23
VTNP04004 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.49■□□□□ 0.23
VTNP04004 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.49■□□□□ 0.23
VTNP04004 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.49■□□□□ 0.23
VTNP04004 MIR4783-201ENST00000580343 82 ntBASIC16.49■□□□□ 0.23
VTNP04004 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.49■□□□□ 0.23
VTNP04004 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
VTNP04004 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VTNP04004 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VTNP04004 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VTNP04004 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 LINC00554-201ENST00000564841 3011 ntBASIC16.48■□□□□ 0.23
VTNP04004 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.48■□□□□ 0.23
VTNP04004 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.48■□□□□ 0.23
VTNP04004 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 AC105917.1-201ENST00000506637 2539 ntBASIC16.48■□□□□ 0.23
VTNP04004 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.48■□□□□ 0.23
VTNP04004 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.48■□□□□ 0.23
VTNP04004 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.48■□□□□ 0.23
VTNP04004 AC005077.2-201ENST00000449786 690 ntBASIC16.48■□□□□ 0.23
VTNP04004 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.48■□□□□ 0.23
VTNP04004 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.48■□□□□ 0.23
VTNP04004 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.48■□□□□ 0.23
VTNP04004 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.48■□□□□ 0.23
VTNP04004 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
VTNP04004 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VTNP04004 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.48■□□□□ 0.23
VTNP04004 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms