Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA1P02708 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA1P02708 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHRNA1P02708 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA1P02708 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHRNA1P02708 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHRNA1P02708 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA1P02708 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA1P02708 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHRNA1P02708 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHRNA1P02708 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA1P02708 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CHRNA1P02708 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA1P02708 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA1P02708 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA1P02708 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CHRNA1P02708 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA1P02708 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA1P02708 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CHRNA1P02708 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.3■□□□□ 0.2
CHRNA1P02708 PDIA3P2-201ENST00000428073 158 ntBASIC16.3■□□□□ 0.2
CHRNA1P02708 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 MPRIPP1-201ENST00000452433 1089 ntBASIC16.3■□□□□ 0.2
CHRNA1P02708 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNA1P02708 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.3■□□□□ 0.2
CHRNA1P02708 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNA1P02708 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA1P02708 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.3■□□□□ 0.2
CHRNA1P02708 ALG3P1-201ENST00000508806 1114 ntBASIC16.3■□□□□ 0.2
CHRNA1P02708 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNA1P02708 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CHRNA1P02708 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA1P02708 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
CHRNA1P02708 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA1P02708 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.3■□□□□ 0.2
CHRNA1P02708 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA1P02708 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA1P02708 SALL4P5-201ENST00000419001 1760 ntBASIC16.3■□□□□ 0.2
CHRNA1P02708 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA1P02708 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHRNA1P02708 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 MROH4P-201ENST00000431302 1578 ntBASIC16.3■□□□□ 0.2
CHRNA1P02708 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA1P02708 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA1P02708 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA1P02708 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHRNA1P02708 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 CROCCP1-201ENST00000426910 5675 ntBASIC16.29■□□□□ 0.2
CHRNA1P02708 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHRNA1P02708 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHRNA1P02708 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHRNA1P02708 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.29■□□□□ 0.2
CHRNA1P02708 RPS2P36-201ENST00000456516 831 ntBASIC16.29■□□□□ 0.2
CHRNA1P02708 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA1P02708 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CHRNA1P02708 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA1P02708 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA1P02708 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA1P02708 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA1P02708 SPCS2P2-201ENST00000603270 608 ntBASIC16.29■□□□□ 0.2
CHRNA1P02708 MIR6720-201ENST00000611664 98 ntBASIC16.29■□□□□ 0.2
CHRNA1P02708 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA1P02708 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA1P02708 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA1P02708 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA1P02708 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CHRNA1P02708 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA1P02708 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA1P02708 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA1P02708 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms