Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.07■□□□□ 0.16
TIMP1P01033 TMBIM7P-202ENST00000641474 1516 ntBASIC16.07■□□□□ 0.16
TIMP1P01033 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMP1P01033 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TIMP1P01033 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.07■□□□□ 0.16
TIMP1P01033 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMP1P01033 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.07■□□□□ 0.16
TIMP1P01033 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMP1P01033 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMP1P01033 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMP1P01033 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMP1P01033 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMP1P01033 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMP1P01033 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMP1P01033 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.06■□□□□ 0.16
TIMP1P01033 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMP1P01033 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMP1P01033 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.06■□□□□ 0.16
TIMP1P01033 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TIMP1P01033 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.06■□□□□ 0.16
TIMP1P01033 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMP1P01033 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMP1P01033 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.06■□□□□ 0.16
TIMP1P01033 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.06■□□□□ 0.16
TIMP1P01033 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.06■□□□□ 0.16
TIMP1P01033 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.06■□□□□ 0.16
TIMP1P01033 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.06■□□□□ 0.16
TIMP1P01033 AC005041.3-201ENST00000606287 649 ntBASIC16.06■□□□□ 0.16
TIMP1P01033 AP001527.2-201ENST00000614441 631 ntBASIC16.06■□□□□ 0.16
TIMP1P01033 AC244250.3-201ENST00000620749 366 ntBASIC16.06■□□□□ 0.16
TIMP1P01033 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMP1P01033 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMP1P01033 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.06■□□□□ 0.16
TIMP1P01033 AC105250.1-201ENST00000509378 2057 ntBASIC16.06■□□□□ 0.16
TIMP1P01033 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TIMP1P01033 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMP1P01033 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TIMP1P01033 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TIMP1P01033 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TIMP1P01033 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TIMP1P01033 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TIMP1P01033 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.05■□□□□ 0.16
TIMP1P01033 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMP1P01033 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMP1P01033 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.05■□□□□ 0.16
TIMP1P01033 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TIMP1P01033 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMP1P01033 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMP1P01033 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TIMP1P01033 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TIMP1P01033 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TIMP1P01033 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.05■□□□□ 0.16
TIMP1P01033 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMP1P01033 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.05■□□□□ 0.16
TIMP1P01033 LINC00634-202ENST00000505157 222 ntBASIC16.05■□□□□ 0.16
TIMP1P01033 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.05■□□□□ 0.16
TIMP1P01033 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.05■□□□□ 0.16
TIMP1P01033 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TIMP1P01033 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.05■□□□□ 0.16
TIMP1P01033 MIR4472-1-201ENST00000584349 80 ntBASIC16.05■□□□□ 0.16
TIMP1P01033 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.05■□□□□ 0.16
TIMP1P01033 AC011247.3-201ENST00000603297 438 ntBASIC16.05■□□□□ 0.16
TIMP1P01033 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.05■□□□□ 0.16
TIMP1P01033 ETV2-207ENST00000619399 994 ntTSL 5 BASIC16.05■□□□□ 0.16
TIMP1P01033 AC073592.2-201ENST00000623062 780 ntBASIC16.05■□□□□ 0.16
TIMP1P01033 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMP1P01033 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMP1P01033 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMP1P01033 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMP1P01033 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMP1P01033 AL139384.1-201ENST00000612143 3047 ntBASIC16.05■□□□□ 0.16
TIMP1P01033 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMP1P01033 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMP1P01033 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TIMP1P01033 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TIMP1P01033 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TIMP1P01033 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TIMP1P01033 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TIMP1P01033 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms