Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CBX6O95503 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
CBX6O95503 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CBX6O95503 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CBX6O95503 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CBX6O95503 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CBX6O95503 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CBX6O95503 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CBX6O95503 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.21■□□□□ 0.03
CBX6O95503 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CBX6O95503 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CBX6O95503 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 OR8S1-201ENST00000310194 1080 ntBASIC15.21■□□□□ 0.03
CBX6O95503 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.21■□□□□ 0.03
CBX6O95503 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.21■□□□□ 0.03
CBX6O95503 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.21■□□□□ 0.03
CBX6O95503 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.21■□□□□ 0.03
CBX6O95503 AC007274.1-201ENST00000439805 662 ntBASIC15.21■□□□□ 0.03
CBX6O95503 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.21■□□□□ 0.03
CBX6O95503 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.21■□□□□ 0.03
CBX6O95503 MEIS3P1-201ENST00000495167 958 ntBASIC15.21■□□□□ 0.03
CBX6O95503 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CBX6O95503 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.21■□□□□ 0.03
CBX6O95503 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CBX6O95503 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.21■□□□□ 0.03
CBX6O95503 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX6O95503 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CBX6O95503 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CBX6O95503 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.21■□□□□ 0.02
CBX6O95503 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.21■□□□□ 0.02
CBX6O95503 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CBX6O95503 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CBX6O95503 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
CBX6O95503 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.21■□□□□ 0.02
CBX6O95503 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.21■□□□□ 0.02
CBX6O95503 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CBX6O95503 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CBX6O95503 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.21■□□□□ 0.02
CBX6O95503 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX6O95503 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CBX6O95503 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CBX6O95503 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX6O95503 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CBX6O95503 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.2■□□□□ 0.02
CBX6O95503 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX6O95503 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.2■□□□□ 0.02
CBX6O95503 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.2■□□□□ 0.02
CBX6O95503 AC092580.3-201ENST00000430932 139 ntBASIC15.2■□□□□ 0.02
CBX6O95503 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.2■□□□□ 0.02
CBX6O95503 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.2■□□□□ 0.02
CBX6O95503 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.2■□□□□ 0.02
CBX6O95503 ALG1L8P-201ENST00000533887 760 ntBASIC15.2■□□□□ 0.02
CBX6O95503 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.2■□□□□ 0.02
CBX6O95503 AL359881.2-201ENST00000602973 570 ntBASIC15.2■□□□□ 0.02
CBX6O95503 MIR6080-201ENST00000617359 66 ntBASIC15.2■□□□□ 0.02
CBX6O95503 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX6O95503 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 MST1P2-201ENST00000457982 2291 ntBASIC15.2■□□□□ 0.02
CBX6O95503 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX6O95503 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CBX6O95503 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms