Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LGR5O75473 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LGR5O75473 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LGR5O75473 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
LGR5O75473 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.74■□□□□ 0.27
LGR5O75473 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.74■□□□□ 0.27
LGR5O75473 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.74■□□□□ 0.27
LGR5O75473 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LGR5O75473 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.74■□□□□ 0.27
LGR5O75473 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.74■□□□□ 0.27
LGR5O75473 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.74■□□□□ 0.27
LGR5O75473 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.74■□□□□ 0.27
LGR5O75473 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.74■□□□□ 0.27
LGR5O75473 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.74■□□□□ 0.27
LGR5O75473 AC005730.2-201ENST00000564549 1184 ntBASIC16.74■□□□□ 0.27
LGR5O75473 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.74■□□□□ 0.27
LGR5O75473 MIR4783-201ENST00000580343 82 ntBASIC16.74■□□□□ 0.27
LGR5O75473 NDUFV2P1-201ENST00000596415 907 ntBASIC16.74■□□□□ 0.27
LGR5O75473 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LGR5O75473 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
LGR5O75473 AC002472.3-201ENST00000640124 621 ntBASIC16.74■□□□□ 0.27
LGR5O75473 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
LGR5O75473 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LGR5O75473 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
LGR5O75473 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LGR5O75473 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LGR5O75473 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.74■□□□□ 0.27
LGR5O75473 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LGR5O75473 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.74■□□□□ 0.27
LGR5O75473 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LGR5O75473 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LGR5O75473 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LGR5O75473 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.73■□□□□ 0.27
LGR5O75473 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LGR5O75473 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LGR5O75473 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
LGR5O75473 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LGR5O75473 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.73■□□□□ 0.27
LGR5O75473 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.73■□□□□ 0.27
LGR5O75473 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.73■□□□□ 0.27
LGR5O75473 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.73■□□□□ 0.27
LGR5O75473 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.73■□□□□ 0.27
LGR5O75473 UPF3AP2-201ENST00000457924 1132 ntBASIC16.73■□□□□ 0.27
LGR5O75473 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.73■□□□□ 0.27
LGR5O75473 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.73■□□□□ 0.27
LGR5O75473 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.73■□□□□ 0.27
LGR5O75473 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.73■□□□□ 0.27
LGR5O75473 AC105129.2-201ENST00000559536 390 ntBASIC16.73■□□□□ 0.27
LGR5O75473 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.73■□□□□ 0.27
LGR5O75473 AC007663.3-201ENST00000609632 465 ntBASIC16.73■□□□□ 0.27
LGR5O75473 AC015967.2-201ENST00000624092 234 ntBASIC16.73■□□□□ 0.27
LGR5O75473 AC006435.4-201ENST00000625037 234 ntBASIC16.73■□□□□ 0.27
LGR5O75473 AL356737.1-201ENST00000634391 234 ntBASIC16.73■□□□□ 0.27
LGR5O75473 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.73■□□□□ 0.27
LGR5O75473 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.73■□□□□ 0.27
LGR5O75473 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LGR5O75473 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
LGR5O75473 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.73■□□□□ 0.27
LGR5O75473 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LGR5O75473 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LGR5O75473 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.72■□□□□ 0.27
LGR5O75473 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LGR5O75473 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.72■□□□□ 0.27
LGR5O75473 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LGR5O75473 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.72■□□□□ 0.27
LGR5O75473 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.72■□□□□ 0.27
LGR5O75473 AC023090.2-201ENST00000625182 2110 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms