Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM3O75382 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM3O75382 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM3O75382 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRIM3O75382 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRIM3O75382 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRIM3O75382 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM3O75382 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRIM3O75382 INTS4P2-202ENST00000614726 2019 ntBASIC14.21□□□□□ -0.13
TRIM3O75382 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRIM3O75382 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRIM3O75382 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.21□□□□□ -0.13
TRIM3O75382 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM3O75382 AC134915.1-201ENST00000426461 574 ntBASIC14.21□□□□□ -0.13
TRIM3O75382 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRIM3O75382 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM3O75382 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM3O75382 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM3O75382 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM3O75382 RN7SL837P-201ENST00000463010 287 ntBASIC14.21□□□□□ -0.13
TRIM3O75382 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.21□□□□□ -0.13
TRIM3O75382 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM3O75382 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.21□□□□□ -0.13
TRIM3O75382 AL359711.2-201ENST00000563105 872 ntBASIC14.21□□□□□ -0.13
TRIM3O75382 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM3O75382 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM3O75382 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM3O75382 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 AC133539.2-201ENST00000604757 467 ntBASIC14.21□□□□□ -0.13
TRIM3O75382 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM3O75382 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM3O75382 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.21□□□□□ -0.14
TRIM3O75382 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM3O75382 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM3O75382 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM3O75382 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRIM3O75382 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.21□□□□□ -0.14
TRIM3O75382 AC013726.1-201ENST00000563747 2285 ntBASIC14.21□□□□□ -0.14
TRIM3O75382 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
TRIM3O75382 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRIM3O75382 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM3O75382 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.21□□□□□ -0.14
TRIM3O75382 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.21□□□□□ -0.14
TRIM3O75382 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.21□□□□□ -0.14
TRIM3O75382 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM3O75382 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.21□□□□□ -0.14
TRIM3O75382 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM3O75382 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM3O75382 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM3O75382 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRIM3O75382 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM3O75382 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TRIM3O75382 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM3O75382 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM3O75382 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRIM3O75382 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 AC005912.2-201ENST00000619492 2400 ntBASIC14.2□□□□□ -0.14
TRIM3O75382 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM3O75382 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.2□□□□□ -0.14
TRIM3O75382 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM3O75382 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM3O75382 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM3O75382 VDAC1P7-201ENST00000462417 847 ntBASIC14.2□□□□□ -0.14
TRIM3O75382 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM3O75382 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.2□□□□□ -0.14
TRIM3O75382 AC124283.3-201ENST00000570869 594 ntBASIC14.2□□□□□ -0.14
TRIM3O75382 AC132938.2-201ENST00000579188 680 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms