Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.4■□□□□ 0.22
EXTL3O43909 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.4■□□□□ 0.22
EXTL3O43909 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.4■□□□□ 0.22
EXTL3O43909 AP000812.2-201ENST00000538934 718 ntBASIC16.4■□□□□ 0.22
EXTL3O43909 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.4■□□□□ 0.22
EXTL3O43909 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.4■□□□□ 0.22
EXTL3O43909 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.4■□□□□ 0.22
EXTL3O43909 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
EXTL3O43909 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.4■□□□□ 0.22
EXTL3O43909 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
EXTL3O43909 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
EXTL3O43909 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
EXTL3O43909 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
EXTL3O43909 FGD5P1-202ENST00000614866 2498 ntBASIC16.4■□□□□ 0.22
EXTL3O43909 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EXTL3O43909 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
EXTL3O43909 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
EXTL3O43909 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
EXTL3O43909 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.39■□□□□ 0.21
EXTL3O43909 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.39■□□□□ 0.21
EXTL3O43909 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
EXTL3O43909 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.39■□□□□ 0.21
EXTL3O43909 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.39■□□□□ 0.21
EXTL3O43909 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.39■□□□□ 0.21
EXTL3O43909 AL590640.2-201ENST00000457038 527 ntBASIC16.39■□□□□ 0.21
EXTL3O43909 MESTP3-201ENST00000503460 968 ntBASIC16.39■□□□□ 0.21
EXTL3O43909 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.39■□□□□ 0.21
EXTL3O43909 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.39■□□□□ 0.21
EXTL3O43909 ECM1P1-201ENST00000604092 1279 ntBASIC16.39■□□□□ 0.21
EXTL3O43909 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.39■□□□□ 0.21
EXTL3O43909 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 CLUHP2-201ENST00000426660 1303 ntBASIC16.39■□□□□ 0.21
EXTL3O43909 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.39■□□□□ 0.21
EXTL3O43909 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.39■□□□□ 0.21
EXTL3O43909 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
EXTL3O43909 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
EXTL3O43909 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
EXTL3O43909 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EXTL3O43909 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.39■□□□□ 0.21
EXTL3O43909 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.38■□□□□ 0.21
EXTL3O43909 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.38■□□□□ 0.21
EXTL3O43909 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
EXTL3O43909 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.38■□□□□ 0.21
EXTL3O43909 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 LINC01101-201ENST00000622953 1884 ntBASIC16.38■□□□□ 0.21
EXTL3O43909 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.38■□□□□ 0.21
EXTL3O43909 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.38■□□□□ 0.21
EXTL3O43909 AP002414.2-201ENST00000591780 3365 ntBASIC16.38■□□□□ 0.21
EXTL3O43909 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.38■□□□□ 0.21
EXTL3O43909 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.38■□□□□ 0.21
EXTL3O43909 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
EXTL3O43909 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.38■□□□□ 0.21
EXTL3O43909 CD8B2-202ENST00000417670 633 ntBASIC16.38■□□□□ 0.21
EXTL3O43909 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.38■□□□□ 0.21
EXTL3O43909 RPL7P3-201ENST00000441388 714 ntBASIC16.38■□□□□ 0.21
EXTL3O43909 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.38■□□□□ 0.21
EXTL3O43909 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.38■□□□□ 0.21
EXTL3O43909 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.38■□□□□ 0.21
EXTL3O43909 AC078819.1-201ENST00000547454 765 ntBASIC16.38■□□□□ 0.21
EXTL3O43909 AC012085.1-201ENST00000548270 765 ntBASIC16.38■□□□□ 0.21
EXTL3O43909 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.38■□□□□ 0.21
EXTL3O43909 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
EXTL3O43909 AC138466.3-201ENST00000619983 221 ntBASIC16.38■□□□□ 0.21
EXTL3O43909 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.38■□□□□ 0.21
EXTL3O43909 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 AL033527.4-201ENST00000641026 673 ntBASIC16.38■□□□□ 0.21
EXTL3O43909 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
EXTL3O43909 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
EXTL3O43909 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
EXTL3O43909 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
EXTL3O43909 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms