Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SLC28A2O43868 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC28A2O43868 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC28A2O43868 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC28A2O43868 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
SLC28A2O43868 AC253536.4-201ENST00000440539 267 ntBASIC14.69□□□□□ -0.06
SLC28A2O43868 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC28A2O43868 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC28A2O43868 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.69□□□□□ -0.06
SLC28A2O43868 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC28A2O43868 AC092337.1-201ENST00000568699 1129 ntBASIC14.69□□□□□ -0.06
SLC28A2O43868 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC28A2O43868 AC133539.2-201ENST00000604757 467 ntBASIC14.69□□□□□ -0.06
SLC28A2O43868 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC28A2O43868 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.69□□□□□ -0.06
SLC28A2O43868 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC28A2O43868 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
SLC28A2O43868 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SLC28A2O43868 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC28A2O43868 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC28A2O43868 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC28A2O43868 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC28A2O43868 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SLC28A2O43868 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC28A2O43868 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SLC28A2O43868 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A2O43868 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SLC28A2O43868 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC28A2O43868 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SLC28A2O43868 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 AC126365.1-201ENST00000578585 1514 ntBASIC14.68□□□□□ -0.06
SLC28A2O43868 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC28A2O43868 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.68□□□□□ -0.06
SLC28A2O43868 AC136604.1-201ENST00000418535 575 ntBASIC14.68□□□□□ -0.06
SLC28A2O43868 ACTG1P3-201ENST00000431775 1114 ntBASIC14.68□□□□□ -0.06
SLC28A2O43868 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC28A2O43868 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC28A2O43868 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC28A2O43868 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC28A2O43868 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC28A2O43868 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC28A2O43868 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC28A2O43868 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC28A2O43868 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC28A2O43868 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.68□□□□□ -0.06
SLC28A2O43868 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.68□□□□□ -0.06
SLC28A2O43868 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC28A2O43868 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SLC28A2O43868 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC28A2O43868 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC28A2O43868 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC28A2O43868 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SLC28A2O43868 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC28A2O43868 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC28A2O43868 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC28A2O43868 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SLC28A2O43868 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
SLC28A2O43868 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.67□□□□□ -0.06
SLC28A2O43868 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SLC28A2O43868 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 FAM45BP-202ENST00000592932 1624 ntBASIC14.67□□□□□ -0.06
SLC28A2O43868 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.67□□□□□ -0.06
SLC28A2O43868 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SLC28A2O43868 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SLC28A2O43868 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms