Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CHMP2AO43633 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP2AO43633 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP2AO43633 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.04■□□□□ 0.32
CHMP2AO43633 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP2AO43633 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.04■□□□□ 0.32
CHMP2AO43633 FO681548.1-201ENST00000455617 1132 ntBASIC17.04■□□□□ 0.32
CHMP2AO43633 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP2AO43633 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.04■□□□□ 0.32
CHMP2AO43633 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 MIR600HG-201ENST00000449175 5984 ntBASIC17.04■□□□□ 0.32
CHMP2AO43633 AC023157.3-201ENST00000619086 2088 ntBASIC17.04■□□□□ 0.32
CHMP2AO43633 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHMP2AO43633 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHMP2AO43633 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP2AO43633 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP2AO43633 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHMP2AO43633 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CHMP2AO43633 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP2AO43633 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHMP2AO43633 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CHMP2AO43633 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CHMP2AO43633 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP2AO43633 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP2AO43633 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 MIR1202-201ENST00000408529 83 ntBASIC17.03■□□□□ 0.32
CHMP2AO43633 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 CSF2RBP1-201ENST00000447905 391 ntBASIC17.03■□□□□ 0.32
CHMP2AO43633 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP2AO43633 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.03■□□□□ 0.32
CHMP2AO43633 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.03■□□□□ 0.32
CHMP2AO43633 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP2AO43633 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.03■□□□□ 0.32
CHMP2AO43633 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.03■□□□□ 0.32
CHMP2AO43633 RN7SL48P-201ENST00000579283 293 ntBASIC17.03■□□□□ 0.32
CHMP2AO43633 AC132938.4-201ENST00000623835 848 ntBASIC17.03■□□□□ 0.32
CHMP2AO43633 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHMP2AO43633 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP2AO43633 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP2AO43633 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP2AO43633 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
CHMP2AO43633 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHMP2AO43633 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP2AO43633 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CHMP2AO43633 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP2AO43633 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.02■□□□□ 0.32
CHMP2AO43633 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.02■□□□□ 0.32
CHMP2AO43633 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.02■□□□□ 0.32
CHMP2AO43633 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.02■□□□□ 0.32
CHMP2AO43633 AL354989.2-201ENST00000435838 1540 ntBASIC17.02■□□□□ 0.32
CHMP2AO43633 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CHMP2AO43633 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP2AO43633 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms