Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
FOXN1O15353 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXN1O15353 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXN1O15353 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
FOXN1O15353 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN1O15353 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXN1O15353 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
FOXN1O15353 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN1O15353 AP001282.1-201ENST00000531301 1499 ntBASIC18.02■□□□□ 0.48
FOXN1O15353 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXN1O15353 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXN1O15353 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN1O15353 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXN1O15353 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
FOXN1O15353 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN1O15353 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN1O15353 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN1O15353 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.02■□□□□ 0.48
FOXN1O15353 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXN1O15353 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXN1O15353 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXN1O15353 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC18.02■□□□□ 0.48
FOXN1O15353 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN1O15353 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXN1O15353 AC079112.1-201ENST00000454972 939 ntBASIC18.02■□□□□ 0.48
FOXN1O15353 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXN1O15353 SLED1-202ENST00000512051 380 ntBASIC18.02■□□□□ 0.48
FOXN1O15353 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXN1O15353 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN1O15353 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXN1O15353 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXN1O15353 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
FOXN1O15353 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXN1O15353 AL691432.1-201ENST00000596308 1422 ntBASIC18.02■□□□□ 0.48
FOXN1O15353 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXN1O15353 AC000095.1-201ENST00000603208 874 ntBASIC18.02■□□□□ 0.48
FOXN1O15353 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
FOXN1O15353 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXN1O15353 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXN1O15353 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXN1O15353 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXN1O15353 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.02■□□□□ 0.47
FOXN1O15353 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.02■□□□□ 0.47
FOXN1O15353 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
FOXN1O15353 AC105250.1-201ENST00000509378 2057 ntBASIC18.02■□□□□ 0.47
FOXN1O15353 AC090616.6-203ENST00000579186 1945 ntBASIC18.02■□□□□ 0.47
FOXN1O15353 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXN1O15353 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
FOXN1O15353 TNRC18P2-201ENST00000417666 2714 ntBASIC18.01■□□□□ 0.47
FOXN1O15353 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
FOXN1O15353 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
FOXN1O15353 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
FOXN1O15353 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 TPM3P8-201ENST00000330554 643 ntBASIC18.01■□□□□ 0.47
FOXN1O15353 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 RPS9P1-201ENST00000419943 583 ntBASIC18.01■□□□□ 0.47
FOXN1O15353 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.01■□□□□ 0.47
FOXN1O15353 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXN1O15353 FAM86KP-201ENST00000509817 987 ntBASIC18.01■□□□□ 0.47
FOXN1O15353 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
FOXN1O15353 AC242376.1-201ENST00000559033 726 ntBASIC18.01■□□□□ 0.47
FOXN1O15353 C2orf69P1-201ENST00000563532 1093 ntBASIC18.01■□□□□ 0.47
FOXN1O15353 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
FOXN1O15353 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXN1O15353 FTLP5-201ENST00000586853 534 ntBASIC18.01■□□□□ 0.47
FOXN1O15353 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.01■□□□□ 0.47
FOXN1O15353 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXN1O15353 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXN1O15353 AC233280.19-201ENST00000633223 136 ntBASIC18.01■□□□□ 0.47
FOXN1O15353 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXN1O15353 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
FOXN1O15353 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
FOXN1O15353 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
FOXN1O15353 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXN1O15353 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18■□□□□ 0.47
FOXN1O15353 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18■□□□□ 0.47
FOXN1O15353 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms