Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.82■□□□□ 0.12
SOX1O00570 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SOX1O00570 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.81■□□□□ 0.12
SOX1O00570 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SOX1O00570 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SOX1O00570 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.81■□□□□ 0.12
SOX1O00570 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 RNF216P1-203ENST00000404404 2427 ntBASIC15.81■□□□□ 0.12
SOX1O00570 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX1O00570 FAM197Y6-201ENST00000420524 766 ntBASIC15.81■□□□□ 0.12
SOX1O00570 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.81■□□□□ 0.12
SOX1O00570 MAGEA7P-201ENST00000436482 942 ntBASIC15.81■□□□□ 0.12
SOX1O00570 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.81■□□□□ 0.12
SOX1O00570 ERP29P1-201ENST00000442902 706 ntBASIC15.81■□□□□ 0.12
SOX1O00570 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 AL451000.1-201ENST00000451300 1186 ntBASIC15.81■□□□□ 0.12
SOX1O00570 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.81■□□□□ 0.12
SOX1O00570 DUX4L50-201ENST00000455245 715 ntBASIC15.81■□□□□ 0.12
SOX1O00570 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX1O00570 RN7SL23P-201ENST00000484055 275 ntBASIC15.81■□□□□ 0.12
SOX1O00570 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX1O00570 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
SOX1O00570 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SOX1O00570 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.81■□□□□ 0.12
SOX1O00570 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX1O00570 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC15.81■□□□□ 0.12
SOX1O00570 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 MIR2392-201ENST00000584881 84 ntBASIC15.81■□□□□ 0.12
SOX1O00570 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
SOX1O00570 PHF23-213ENST00000613632 850 ntTSL 5 BASIC15.81■□□□□ 0.12
SOX1O00570 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SOX1O00570 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SOX1O00570 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.81■□□□□ 0.12
SOX1O00570 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SOX1O00570 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX1O00570 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SOX1O00570 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX1O00570 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SOX1O00570 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 AL109809.1-201ENST00000418979 1367 ntBASIC15.8■□□□□ 0.12
SOX1O00570 HLF-202ENST00000430986 1385 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX1O00570 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SOX1O00570 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.8■□□□□ 0.12
SOX1O00570 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC15.8■□□□□ 0.12
SOX1O00570 AC027612.2-202ENST00000445955 1199 ntBASIC15.8■□□□□ 0.12
SOX1O00570 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.8■□□□□ 0.12
SOX1O00570 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX1O00570 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.8■□□□□ 0.12
SOX1O00570 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC15.8■□□□□ 0.12
SOX1O00570 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.8■□□□□ 0.12
SOX1O00570 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.8■□□□□ 0.12
SOX1O00570 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.8■□□□□ 0.12
SOX1O00570 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.8■□□□□ 0.12
SOX1O00570 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX1O00570 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX1O00570 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.8■□□□□ 0.12
SOX1O00570 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 AC005915.1-201ENST00000624912 2018 ntBASIC15.8■□□□□ 0.12
SOX1O00570 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SOX1O00570 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.8■□□□□ 0.12
SOX1O00570 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SOX1O00570 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.79■□□□□ 0.12
SOX1O00570 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.79■□□□□ 0.12
SOX1O00570 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms