Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPB4C9JG80 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPB4C9JG80 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPB4C9JG80 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 MESTP3-201ENST00000503460 968 ntBASIC13.36□□□□□ -0.27
NPIPB4C9JG80 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPB4C9JG80 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 AC098614.1-201ENST00000368528 745 ntBASIC13.35□□□□□ -0.27
NPIPB4C9JG80 BAATP1-201ENST00000412284 1225 ntBASIC13.35□□□□□ -0.27
NPIPB4C9JG80 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 ALG3P1-201ENST00000508806 1114 ntBASIC13.35□□□□□ -0.27
NPIPB4C9JG80 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 PTP4A1P2-201ENST00000546033 454 ntBASIC13.35□□□□□ -0.27
NPIPB4C9JG80 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 MIR5189-201ENST00000577370 114 ntBASIC13.35□□□□□ -0.27
NPIPB4C9JG80 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 AC138696.2-201ENST00000607376 223 ntBASIC13.35□□□□□ -0.27
NPIPB4C9JG80 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 AP002414.2-201ENST00000591780 3365 ntBASIC13.35□□□□□ -0.27
NPIPB4C9JG80 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPB4C9JG80 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
NPIPB4C9JG80 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms