Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 CYP46A4P-201ENST00000414953 267 ntBASIC13.18□□□□□ -0.3
MBD3L3A6NE82 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 AC026740.1-201ENST00000607068 791 ntBASIC13.18□□□□□ -0.3
MBD3L3A6NE82 AC084346.2-201ENST00000607097 949 ntBASIC13.18□□□□□ -0.3
MBD3L3A6NE82 AC090164.2-201ENST00000611487 516 ntBASIC13.18□□□□□ -0.3
MBD3L3A6NE82 AL021578.1-201ENST00000613646 709 ntBASIC13.18□□□□□ -0.3
MBD3L3A6NE82 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MBD3L3A6NE82 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 ZBED1P1-201ENST00000502364 1930 ntBASIC13.17□□□□□ -0.3
MBD3L3A6NE82 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 PUDPP3-201ENST00000445368 636 ntBASIC13.17□□□□□ -0.3
MBD3L3A6NE82 SPTLC1P5-201ENST00000450718 252 ntBASIC13.17□□□□□ -0.3
MBD3L3A6NE82 AL035414.1-201ENST00000451327 857 ntBASIC13.17□□□□□ -0.3
MBD3L3A6NE82 AC104073.2-201ENST00000453737 312 ntBASIC13.17□□□□□ -0.3
MBD3L3A6NE82 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 AC091544.8-201ENST00000619490 361 ntBASIC13.17□□□□□ -0.3
MBD3L3A6NE82 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 AC244394.1-201ENST00000435000 1665 ntBASIC13.17□□□□□ -0.3
MBD3L3A6NE82 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms