Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AC015910.1-201ENST00000579400 975 ntBASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 SPDYE11-202ENST00000450699 704 ntBASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 RNA5SP419-201ENST00000515908 135 ntBASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 AC034105.1-201ENST00000563488 319 ntBASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 SPDYE9P-201ENST00000570642 692 ntBASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 SPDYE10P-202ENST00000612005 668 ntBASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 SPDYE8P-202ENST00000612377 668 ntBASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 AC092865.6-201ENST00000642101 219 ntBASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV18A0A075B6X5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV18A0A075B6X5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
TRAV18A0A075B6X5 UXT-AS1-201ENST00000590504 1525 ntBASIC13.08□□□□□ -0.31
TRAV18A0A075B6X5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.08□□□□□ -0.31
TRAV18A0A075B6X5 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
TRAV18A0A075B6X5 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV18A0A075B6X5 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 AC004870.1-201ENST00000315132 882 ntBASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 MRPL3P1-201ENST00000400109 1033 ntBASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 HIST3H2BA-201ENST00000436555 524 ntBASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV18A0A075B6X5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms