Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 AJ011931.1-201ENST00000618749 2492 ntBASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 REXO1L2P-201ENST00000425429 2069 ntBASIC16.97■□□□□ 0.31
COL4A3BPQ9Y5P4 KRT8P35-201ENST00000483942 1338 ntBASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 KLF2P2-201ENST00000416807 1039 ntBASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 RPS2P32-201ENST00000439199 892 ntBASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 RPL7P3-201ENST00000441388 714 ntBASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 AC244669.2-201ENST00000612320 853 ntBASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A3BPQ9Y5P4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
COL4A3BPQ9Y5P4 AL359258.3-201ENST00000622910 2331 ntBASIC16.96■□□□□ 0.3
COL4A3BPQ9Y5P4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COL4A3BPQ9Y5P4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.96■□□□□ 0.3
COL4A3BPQ9Y5P4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.96■□□□□ 0.3
COL4A3BPQ9Y5P4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.96■□□□□ 0.3
COL4A3BPQ9Y5P4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.96■□□□□ 0.3
COL4A3BPQ9Y5P4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL4A3BPQ9Y5P4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.3
COL4A3BPQ9Y5P4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 AP000812.2-201ENST00000538934 718 ntBASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 PRSS30P-206ENST00000641773 873 ntBASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms