Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 AC124283.3-201ENST00000570869 594 ntBASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 NUS1P3-201ENST00000423502 862 ntBASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AC134915.1-201ENST00000426461 574 ntBASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AL355864.2-201ENST00000447420 863 ntBASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AC007551.1-201ENST00000457394 519 ntBASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 FTH1P14-201ENST00000482930 551 ntBASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AC103810.3-201ENST00000583567 96 ntBASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 AL360270.3-201ENST00000609118 1348 ntBASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB1Q9Y5F3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 AC126755.1-201ENST00000525846 6405 ntBASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHB1Q9Y5F3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms