Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 AC074386.1-202ENST00000463561 864 ntBASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 KRT18P35-201ENST00000510488 1269 ntBASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP3Q9Y2W7 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 AC079776.4-201ENST00000511039 504 ntBASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 AL773604.1-201ENST00000617417 272 ntBASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 AC148477.8-201ENST00000624298 468 ntBASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP3Q9Y2W7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP3Q9Y2W7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
KCNIP3Q9Y2W7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP3Q9Y2W7 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP3Q9Y2W7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms