Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 AP001282.1-201ENST00000531301 1499 ntBASIC13.57□□□□□ -0.24
NLKQ9UBE8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 DNAJB3-202ENST00000449667 1266 ntBASIC13.57□□□□□ -0.24
NLKQ9UBE8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 AC026979.3-201ENST00000607315 403 ntBASIC13.57□□□□□ -0.24
NLKQ9UBE8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 PPT1-213ENST00000641319 2388 ntBASIC13.57□□□□□ -0.24
NLKQ9UBE8 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.57□□□□□ -0.24
NLKQ9UBE8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NLKQ9UBE8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 AC113367.3-201ENST00000508316 1912 ntBASIC13.56□□□□□ -0.24
NLKQ9UBE8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 AC011474.4-201ENST00000623523 2076 ntBASIC13.56□□□□□ -0.24
NLKQ9UBE8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 AL353705.2-201ENST00000428243 662 ntBASIC13.56□□□□□ -0.24
NLKQ9UBE8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 AC243562.2-201ENST00000561247 970 ntBASIC13.56□□□□□ -0.24
NLKQ9UBE8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.56□□□□□ -0.24
NLKQ9UBE8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NLKQ9UBE8 AC152010.1-201ENST00000415779 2006 ntBASIC13.56□□□□□ -0.24
NLKQ9UBE8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NLKQ9UBE8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NLKQ9UBE8 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms