Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 AC113367.3-201ENST00000508316 1912 ntBASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 AL138725.1-201ENST00000407347 1314 ntBASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 AC245100.3-201ENST00000441281 285 ntBASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 BCRP2-202ENST00000447763 634 ntBASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 BCRP6-201ENST00000510112 632 ntBASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 BCRP7-201ENST00000511549 544 ntBASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 RN7SL48P-201ENST00000579283 293 ntBASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 AC233724.13-201ENST00000598383 410 ntBASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 ENPP7P14-201ENST00000621765 1040 ntBASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 AC097359.2-201ENST00000604992 2389 ntBASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BLOC1S4Q9NUP1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 AC007191.1-201ENST00000623179 2995 ntBASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 MESTP3-201ENST00000503460 968 ntBASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 BTNL10-201ENST00000595971 695 ntBASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.77■□□□□ 0.28
BLOC1S4Q9NUP1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 INE2-201ENST00000630399 1874 ntBASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 AL513477.1-201ENST00000602865 2407 ntBASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 AL354702.1-201ENST00000442006 1960 ntBASIC16.77■□□□□ 0.27
BLOC1S4Q9NUP1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BLOC1S4Q9NUP1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms