Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 UGT1A2P-201ENST00000454886 866 ntBASIC14.44□□□□□ -0.1
BBS4Q96RK4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 AC004233.3-201ENST00000607794 1269 ntBASIC14.44□□□□□ -0.1
BBS4Q96RK4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 AJ011932.1-201ENST00000621707 465 ntBASIC14.44□□□□□ -0.1
BBS4Q96RK4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.44□□□□□ -0.1
BBS4Q96RK4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BBS4Q96RK4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 AC007787.1-201ENST00000588095 1583 ntBASIC14.43□□□□□ -0.1
BBS4Q96RK4 AC106881.1-201ENST00000605849 3329 ntBASIC14.43□□□□□ -0.1
BBS4Q96RK4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 AL138799.1-201ENST00000448213 1675 ntBASIC14.43□□□□□ -0.1
BBS4Q96RK4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 TSPY16P-201ENST00000449843 468 ntBASIC14.43□□□□□ -0.1
BBS4Q96RK4 GAPDHP40-201ENST00000505218 1006 ntBASIC14.43□□□□□ -0.1
BBS4Q96RK4 AC026410.3-201ENST00000514280 936 ntBASIC14.43□□□□□ -0.1
BBS4Q96RK4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 SLC7A15P-201ENST00000424028 1363 ntBASIC14.43□□□□□ -0.1
BBS4Q96RK4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BBS4Q96RK4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.43□□□□□ -0.1
BBS4Q96RK4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms