Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 COL6A4P2-202ENST00000504443 2753 ntBASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 AL137783.1-201ENST00000623494 1896 ntBASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 AL161772.1-201ENST00000610494 4412 ntBASIC17.61■□□□□ 0.41
CHAMP1Q96JM3 MBLAC2-202ENST00000514906 1936 ntBASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AC011474.4-201ENST00000623523 2076 ntBASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AC105206.1-202ENST00000314927 2368 ntBASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AL139400.1-201ENST00000366220 510 ntBASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 TOMM22P5-201ENST00000416399 439 ntBASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AC254562.1-201ENST00000417586 456 ntBASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AL589987.1-201ENST00000453380 819 ntBASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 KRT18P43-201ENST00000469825 1281 ntBASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 SAMD11P1-201ENST00000571429 661 ntBASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AL096865.1-201ENST00000606796 927 ntBASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHAMP1Q96JM3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms