Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM11Q96F44 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRIM11Q96F44 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 AC113367.3-201ENST00000508316 1912 ntBASIC16.06■□□□□ 0.16
TRIM11Q96F44 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 SLC7A15P-201ENST00000424028 1363 ntBASIC16.06■□□□□ 0.16
TRIM11Q96F44 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 AL442647.2-201ENST00000429864 857 ntBASIC16.06■□□□□ 0.16
TRIM11Q96F44 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 AC093726.1-201ENST00000608064 963 ntBASIC16.06■□□□□ 0.16
TRIM11Q96F44 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 AL603764.1-201ENST00000636452 321 ntBASIC16.06■□□□□ 0.16
TRIM11Q96F44 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 AC005912.2-201ENST00000619492 2400 ntBASIC16.06■□□□□ 0.16
TRIM11Q96F44 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM11Q96F44 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM11Q96F44 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 AC023908.3-201ENST00000564211 3047 ntBASIC16.05■□□□□ 0.16
TRIM11Q96F44 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 AL139094.1-201ENST00000405549 1188 ntBASIC16.05■□□□□ 0.16
TRIM11Q96F44 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 PMS2P2-201ENST00000425039 1128 ntBASIC16.05■□□□□ 0.16
TRIM11Q96F44 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM11Q96F44 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.05■□□□□ 0.16
TRIM11Q96F44 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms