Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 AC009947.1-201ENST00000444350 727 ntBASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 AF186996.4-201ENST00000467186 377 ntBASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 AC025181.2-201ENST00000606994 802 ntBASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 AC099522.2-201ENST00000607001 744 ntBASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 AKAP8P1-201ENST00000434743 1349 ntBASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 FAM90A12P-201ENST00000519497 2375 ntBASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 FAM90A24P-201ENST00000520792 2369 ntBASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 AC012617.1-204ENST00000586340 2305 ntBASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 KRT18P67-201ENST00000432816 1264 ntBASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM4Q8WVI0 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM4Q8WVI0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms