Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 AC211429.1-201ENST00000415277 523 ntBASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 RPS8P6-201ENST00000426177 609 ntBASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 AC104819.1-201ENST00000504587 486 ntBASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 AC061975.2-201ENST00000581722 295 ntBASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 AL645728.2-201ENST00000641974 660 ntBASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 AGGF1P1-201ENST00000509500 2073 ntBASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCAS4Q8TDM0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 FAM185BP-201ENST00000443595 716 ntBASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 PRYP6-201ENST00000514804 343 ntBASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 AC099336.1-202ENST00000602961 463 ntBASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 AC005363.2-201ENST00000618631 242 ntBASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.27■□□□□ 0.04
BCAS4Q8TDM0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BCAS4Q8TDM0 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCAS4Q8TDM0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms