Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB3IL1Q8TBN0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAB3IL1Q8TBN0 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RAB3IL1Q8TBN0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RAB3IL1Q8TBN0 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC15.21■□□□□ 0.02
RAB3IL1Q8TBN0 AC055811.4-201ENST00000624039 1754 ntBASIC15.21■□□□□ 0.02
RAB3IL1Q8TBN0 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
RAB3IL1Q8TBN0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB3IL1Q8TBN0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 AP3S2-216ENST00000617003 1561 ntBASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 AL133267.1-201ENST00000398220 340 ntBASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 SPDYE17-201ENST00000412399 783 ntBASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 HIST3H2BA-201ENST00000436555 524 ntBASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 AC243562.1-201ENST00000560672 389 ntBASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 AC140113.2-201ENST00000604370 208 ntBASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IL1Q8TBN0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms