Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.71□□□□□ -0.22
FNDC9Q8TBE3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
FNDC9Q8TBE3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FNDC9Q8TBE3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FNDC9Q8TBE3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 SNX29P1-201ENST00000548357 1007 ntBASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 AL158070.2-201ENST00000623713 1621 ntBASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 SSR4P1-203ENST00000599569 2260 ntBASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
FNDC9Q8TBE3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 KRT8P35-201ENST00000483942 1338 ntBASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 KLF2P2-201ENST00000416807 1039 ntBASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 NUS1P3-201ENST00000423502 862 ntBASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 CTBP2P5-201ENST00000454986 1264 ntBASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 AC007551.1-201ENST00000457394 519 ntBASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 FTH1P14-201ENST00000482930 551 ntBASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 AC104989.1-201ENST00000519711 778 ntBASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 MIR6775-201ENST00000617557 69 ntBASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms