Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 PRAL-201ENST00000624952 3286 ntBASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 ACE3P-201ENST00000423435 1973 ntBASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 AP000911.2-201ENST00000534330 502 ntBASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 AC007326.1-201ENST00000604539 458 ntBASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 AC087392.5-201ENST00000612517 489 ntBASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 AC006504.5-208ENST00000588784 2401 ntBASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 MIR645-201ENST00000385283 94 ntBASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 HLA-DMA-203ENST00000395305 777 ntBASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 AC009084.3-201ENST00000623356 437 ntBASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
COL27A1Q8IZC6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
COL27A1Q8IZC6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
COL27A1Q8IZC6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
COL27A1Q8IZC6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
COL27A1Q8IZC6 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
COL27A1Q8IZC6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.83□□□□□ -0.19
COL27A1Q8IZC6 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.83□□□□□ -0.19
COL27A1Q8IZC6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC13.83□□□□□ -0.19
COL27A1Q8IZC6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.83□□□□□ -0.2
COL27A1Q8IZC6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms