Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 SAPCD2P3-201ENST00000455031 850 ntBASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 MIR3652-201ENST00000579335 131 ntBASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 AC005593.1-201ENST00000624894 515 ntBASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 MIR497HG-202ENST00000572453 3838 ntBASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 AL354702.1-201ENST00000442006 1960 ntBASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 PRSS29P-201ENST00000440800 595 ntBASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 RNPS1P1-201ENST00000507437 918 ntBASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 AC012640.2-201ENST00000561606 901 ntBASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 AL450472.2-201ENST00000603663 1156 ntBASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms