Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 PEG13-201ENST00000631594 5667 ntBASIC15.75■□□□□ 0.11
CCDC25Q86WR0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC25Q86WR0 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 AC138969.3-201ENST00000546612 1459 ntBASIC15.74■□□□□ 0.11
CCDC25Q86WR0 AC138932.2-201ENST00000548268 1459 ntBASIC15.74■□□□□ 0.11
CCDC25Q86WR0 AC126755.4-201ENST00000549796 1459 ntBASIC15.74■□□□□ 0.11
CCDC25Q86WR0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 SPDYE17-201ENST00000412399 783 ntBASIC15.74■□□□□ 0.11
CCDC25Q86WR0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 KRT18P32-201ENST00000424695 1287 ntBASIC15.74■□□□□ 0.11
CCDC25Q86WR0 KRT18P64-201ENST00000434946 1219 ntBASIC15.74■□□□□ 0.11
CCDC25Q86WR0 ACTG1P14-201ENST00000446382 1122 ntBASIC15.74■□□□□ 0.11
CCDC25Q86WR0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC25Q86WR0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 AC074338.1-201ENST00000416825 156 ntBASIC15.73■□□□□ 0.11
CCDC25Q86WR0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 AC025181.2-201ENST00000606994 802 ntBASIC15.73■□□□□ 0.11
CCDC25Q86WR0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
CCDC25Q86WR0 BX640515.1-201ENST00000617215 977 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms