Protein–RNA interactions for Protein: Q86VZ5

SGMS1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1Q86VZ5 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 BOLA2P3-201ENST00000404566 256 ntBASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 AC007292.2-201ENST00000593524 1812 ntBASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 AC140479.7-201ENST00000636301 2332 ntBASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.53■□□□□ 0.4
SGMS1Q86VZ5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 PDIA3P1-201ENST00000471856 1510 ntBASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 LINC00552-201ENST00000625151 2579 ntBASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 AC112492.5-201ENST00000421897 457 ntBASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 RPL7P3-201ENST00000441388 714 ntBASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 AL512343.1-201ENST00000605837 169 ntBASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS1Q86VZ5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.52■□□□□ 0.39
SGMS1Q86VZ5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SGMS1Q86VZ5 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.52■□□□□ 0.39
SGMS1Q86VZ5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.52■□□□□ 0.39
SGMS1Q86VZ5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SGMS1Q86VZ5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SGMS1Q86VZ5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SGMS1Q86VZ5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.52■□□□□ 0.39
SGMS1Q86VZ5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SGMS1Q86VZ5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SGMS1Q86VZ5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 FKBP4P6-201ENST00000457486 1332 ntBASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 FAM45BP-202ENST00000592932 1624 ntBASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 RN7SKP175-201ENST00000408472 289 ntBASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.51■□□□□ 0.39
SGMS1Q86VZ5 GCOM2-201ENST00000509133 1104 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms