Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 BAATP1-201ENST00000412284 1225 ntBASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 AC012441.1-201ENST00000446669 685 ntBASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 AC114812.1-204ENST00000449669 728 ntBASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 KRT18P25-201ENST00000508931 1278 ntBASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 AC008735.3-201ENST00000596646 500 ntBASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 AL008721.1-201ENST00000609964 604 ntBASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 AC007292.2-201ENST00000593524 1812 ntBASIC15.27■□□□□ 0.03
LYSMD3Q7Z3D4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 KRT8P14-201ENST00000414254 1442 ntBASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 GRK6P1-201ENST00000400595 1711 ntBASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 AC134312.5-201ENST00000568031 1313 ntBASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 ACE3P-201ENST00000423435 1973 ntBASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 USP32P1-208ENST00000506594 1164 ntBASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 AC015936.2-201ENST00000593177 259 ntBASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 AC063926.3-201ENST00000624734 5658 ntBASIC15.26■□□□□ 0.03
LYSMD3Q7Z3D4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 LILRP1-201ENST00000444199 1370 ntBASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 AL137783.1-201ENST00000623494 1896 ntBASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD3Q7Z3D4 KRT8P35-201ENST00000483942 1338 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms