Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 AC103810.10-201ENST00000606504 343 ntBASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 AL162426.1-201ENST00000624141 743 ntBASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 AC127024.7-201ENST00000625101 200 ntBASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
OTOP1Q7RTM1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 AL157792.1-201ENST00000488281 530 ntBASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 AC074138.1-201ENST00000611182 1303 ntBASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 CROCCP1-201ENST00000426910 5675 ntBASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OTOP1Q7RTM1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 AC010234.1-201ENST00000494599 870 ntBASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 IGHV3-37-201ENST00000518544 340 ntBASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 AP002803.1-201ENST00000528836 498 ntBASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 MIR4649-201ENST00000582839 64 ntBASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 AC242376.2-201ENST00000619355 883 ntBASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 NAP1L6-202ENST00000641404 1222 ntBASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OTOP1Q7RTM1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms